BLASTX nr result

ID: Cephaelis21_contig00035662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035662
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat...   132   4e-29
emb|CBI29893.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t...   125   3e-27
ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat...   120   9e-26

>ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 3    IFDNMPERTVISWNAMLVGYSRHGMGXXXXXXXXXXXXXSRVRPNNVTLLAVLSGCSHGG 182
            IFD+MPERTVISWNAMLVGYS+HG+G             ++V+P++VT LAVLSGCSHGG
Sbjct: 736  IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 795

Query: 183  LEHKGLEFFDEMLSEMGGIELKIEHYACVVDLLGRSGQLERA 308
            +E +GLE F EM+++  G E +IEHY CVVDL GR+G++E A
Sbjct: 796  MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 837


>emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/102 (59%), Positives = 78/102 (76%)
 Frame = +3

Query: 3   IFDNMPERTVISWNAMLVGYSRHGMGXXXXXXXXXXXXXSRVRPNNVTLLAVLSGCSHGG 182
           IFD+MPERTVISWNAMLVGYS+HG+G             ++V+P++VT LAVLSGCSHGG
Sbjct: 269 IFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGG 328

Query: 183 LEHKGLEFFDEMLSEMGGIELKIEHYACVVDLLGRSGQLERA 308
           +E +GLE F EM+++  G E +IEHY CVVDL GR+G++E A
Sbjct: 329 MEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 370


>ref|XP_002322694.1| predicted protein [Populus trichocarpa] gi|222867324|gb|EEF04455.1|
           predicted protein [Populus trichocarpa]
          Length = 586

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/102 (61%), Positives = 76/102 (74%)
 Frame = +3

Query: 3   IFDNMPERTVISWNAMLVGYSRHGMGXXXXXXXXXXXXXSRVRPNNVTLLAVLSGCSHGG 182
           IF+NMP RTVISWNAMLVGYS+HG G             ++V+P++VT LAVLSGCSHGG
Sbjct: 269 IFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGG 328

Query: 183 LEHKGLEFFDEMLSEMGGIELKIEHYACVVDLLGRSGQLERA 308
           LE KGLE FDEM++    IE  IEHY CV+DLLGR+G++E A
Sbjct: 329 LEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEA 370


>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 840

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/102 (60%), Positives = 75/102 (73%)
 Frame = +3

Query: 3   IFDNMPERTVISWNAMLVGYSRHGMGXXXXXXXXXXXXXSRVRPNNVTLLAVLSGCSHGG 182
           IFD M ERTVISWNAMLVGYS+HG G             ++V+P++VT+LAVLSGCSHGG
Sbjct: 523 IFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGG 582

Query: 183 LEHKGLEFFDEMLSEMGGIELKIEHYACVVDLLGRSGQLERA 308
           LE KGL  F++M S    +E K+EHY CVVDLLGRSG++E A
Sbjct: 583 LEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEA 624


>ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = +3

Query: 3   IFDNMPERTVISWNAMLVGYSRHGMGXXXXXXXXXXXXXSRVRPNNVTLLAVLSGCSHGG 182
           IFD+MPERT ISWNAMLVGYS+HGM              ++V+P+++T LAVLSGCSHG 
Sbjct: 321 IFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQ 380

Query: 183 LEHKGLEFFDEMLSEMGGIELKIEHYACVVDLLGRSGQLERA 308
           LE  GLE F  M++   GIE  I HY CVVDLLGR+G++E A
Sbjct: 381 LEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 422


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