BLASTX nr result

ID: Cephaelis21_contig00035085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00035085
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   160   2e-37
emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]        158   2e-36
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...   157   2e-36
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   155   1e-35
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   151   2e-35

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  160 bits (406), Expect = 2e-37
 Identities = 87/232 (37%), Positives = 132/232 (56%)
 Frame = -2

Query: 809  ISEDLLMAVHEFFMGVPLPRVISSTQLILLPKKQSPSSFADFRPISLCTFLNKIFTRILC 630
            +  D++ +V +FF+   L + I+S  ++L+PK        D+RPI+L  F  KI ++IL 
Sbjct: 477  VGADVIQSVQDFFISGQLAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILA 536

Query: 629  DRVEPLLPKLISEEQSAFLKGWDIADNILLAQEAVQHLHCRARGHNVILKLDMMKAFDRV 450
            DR+  +  ++IS EQ  F++  DI+  ++LA EA+  L  R  G NV LK+D+ KAFD +
Sbjct: 537  DRLADITMRIISVEQRGFIRDRDISKCVILASEAINLLEKRQYGGNVALKVDIAKAFDTL 596

Query: 449  SWXXXXXXXXXXXLYVNFVSLIMNNLQASHFSVLINGFSAEFFTASRGLKQGNPLSPILF 270
             W               FV  I+  LQ++  SVL+NG +  FFT S G++QG+PLSP+LF
Sbjct: 597  DWNFLLAVLQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLF 656

Query: 269  ILLTETLSRGLKHLVATNQLQQYTMSRGAPILTHLSFADNLIIFSRRLKKTI 114
             L+ E LSR L       QL   +  RG    TH+ +AD+++IF    K+ I
Sbjct: 657  CLVEEVLSRALSMAATDGQLIPMSYCRGVSFPTHILYADDVLIFCTGTKRNI 708


>emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
          Length = 1285

 Score =  158 bits (399), Expect = 2e-36
 Identities = 86/232 (37%), Positives = 131/232 (56%), Gaps = 2/232 (0%)
 Frame = -2

Query: 809  ISEDLLMAVHEFFMGVPLPRVISSTQLILLPKKQSPSSFADFRPISLCTFLNKIFTRILC 630
            +  D+++AV  FF    +P  ++ T ++L+PKK  P    D+RPISLC  + K+ ++ L 
Sbjct: 1015 LKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLV 1074

Query: 629  DRVEPLLPKLISEEQSAFLKGWDIADNILLAQEAVQHLHCRARGHNV--ILKLDMMKAFD 456
            +R+ P+L  L+S+EQSAF++G  I DN LLA E    +    + ++     KLD+ KA+D
Sbjct: 1075 NRLRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDLSKAYD 1134

Query: 455  RVSWXXXXXXXXXXXLYVNFVSLIMNNLQASHFSVLINGFSAEFFTASRGLKQGNPLSPI 276
            RV W               +VS IM+ +    +SV  NG     F  +RGL+QG+PLSP 
Sbjct: 1135 RVDWRFLELALNKLGFAHRWVSWIMSCVTTVRYSVKFNGTLLRSFAPTRGLRQGDPLSPF 1194

Query: 275  LFILLTETLSRGLKHLVATNQLQQYTMSRGAPILTHLSFADNLIIFSRRLKK 120
            LF+ + + LS  LK  VA N L    +   AP ++HL FAD+ ++F +  KK
Sbjct: 1195 LFLFVADGLSLLLKEKVAQNSLTPLKICCQAPGISHLLFADDTLLFFKAEKK 1246


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score =  157 bits (398), Expect = 2e-36
 Identities = 86/232 (37%), Positives = 131/232 (56%), Gaps = 2/232 (0%)
 Frame = -2

Query: 809  ISEDLLMAVHEFFMGVPLPRVISSTQLILLPKKQSPSSFADFRPISLCTFLNKIFTRILC 630
            +  D+++AV  FF    +P+ ++ T ++L+PKK  P    D+RPISLC  + K+ ++ L 
Sbjct: 1103 LKSDIILAVRNFFQSGLMPKGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLV 1162

Query: 629  DRVEPLLPKLISEEQSAFLKGWDIADNILLAQEAVQHLHCRARGHNV--ILKLDMMKAFD 456
            +R+ P+L  L+S+EQSAF++G  I DN LLA E    +    + ++     KLD+ KA+D
Sbjct: 1163 NRLRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDLSKAYD 1222

Query: 455  RVSWXXXXXXXXXXXLYVNFVSLIMNNLQASHFSVLINGFSAEFFTASRGLKQGNPLSPI 276
            RV W               +VS IM  +    +SV  NG     F  +RGL+QG PLSP 
Sbjct: 1223 RVDWRFLELALNKLGFAHRWVSWIMLCVTTVRYSVKFNGTLLRSFAPTRGLRQGEPLSPF 1282

Query: 275  LFILLTETLSRGLKHLVATNQLQQYTMSRGAPILTHLSFADNLIIFSRRLKK 120
            LF+ + + LS  LK  VA N L    + R AP +++L FAD+ ++F +  KK
Sbjct: 1283 LFLFVADGLSLLLKEKVAQNSLTPLKICRQAPGISYLLFADDTLLFFKAEKK 1334


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  155 bits (391), Expect = 1e-35
 Identities = 85/225 (37%), Positives = 136/225 (60%), Gaps = 1/225 (0%)
 Frame = -2

Query: 809 ISEDLLMAVHEFF-MGVPLPRVISSTQLILLPKKQSPSSFADFRPISLCTFLNKIFTRIL 633
           + ED++ AV +FF  G  LP   ++T LIL+PK Q+  S   FRPI++  F  KI ++IL
Sbjct: 151 VKEDVIKAVLQFFNTGWILPNFNANT-LILIPKTQNADSMDQFRPIAMANFKFKIISKIL 209

Query: 632 CDRVEPLLPKLISEEQSAFLKGWDIADNILLAQEAVQHLHCRARGHNVILKLDMMKAFDR 453
            DR+  ++P ++S+EQ  F++G +I D + LA EA+  L  ++ G N+  K+D+ KAFD 
Sbjct: 210 ADRLAQIMPNIVSQEQRGFIQGRNIKDCVCLASEAINMLDQKSFGGNLAFKVDISKAFDT 269

Query: 452 VSWXXXXXXXXXXXLYVNFVSLIMNNLQASHFSVLINGFSAEFFTASRGLKQGNPLSPIL 273
           ++W               F + I   LQ++  S+ ING    +F+ SRG++QG+PLSP+L
Sbjct: 270 LNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSICINGSQQGYFSCSRGVRQGDPLSPLL 329

Query: 272 FILLTETLSRGLKHLVATNQLQQYTMSRGAPILTHLSFADNLIIF 138
           F L  + LSR L  LV   +L+Q   +R   + +H+ +AD+++IF
Sbjct: 330 FCLAEDVLSRSLTKLVEQGKLKQMRGTRNCLVPSHILYADDIMIF 374


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  151 bits (382), Expect(2) = 2e-35
 Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 2/228 (0%)
 Frame = -2

Query: 809  ISEDLLMAVHEFFMGVPLPRVISSTQLILLPKKQSPSSFADFRPISLCTFLNKIFTRILC 630
            I +D+   V     G   P  I+ T + L+PK ++P++ A+FRPI+LC  + K+ ++ L 
Sbjct: 467  IGDDVTQFVSSILHGSISPSCINHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALV 526

Query: 629  DRVEPLLPKLISEEQSAFLKGWDIADNILLAQEAVQHL--HCRARGHNVILKLDMMKAFD 456
             R++  LP+L+SE QSAF+ G  I DN L+A E    +    R+R   + +KLDM KA+D
Sbjct: 527  IRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDMSKAYD 586

Query: 455  RVSWXXXXXXXXXXXLYVNFVSLIMNNLQASHFSVLINGFSAEFFTASRGLKQGNPLSPI 276
            RV W               +V+LIM+ + +  +S +ING      T +RGL+ G+PLSP 
Sbjct: 587  RVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHGDPLSPY 646

Query: 275  LFILLTETLSRGLKHLVATNQLQQYTMSRGAPILTHLSFADNLIIFSR 132
            LFIL+ +  S+ ++  V   QL     SR  P+++HL FAD  ++F+R
Sbjct: 647  LFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTR 694



 Score = 24.3 bits (51), Expect(2) = 2e-35
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 132 KAEKNDCCI-GRISGTFEEVTEQRINRDKSCFVASRRCSTSQ 10
           +A + +C I   I   +E+ + Q+IN DKS    S+  S +Q
Sbjct: 694 RASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQ 735


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