BLASTX nr result

ID: Cephaelis21_contig00034389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034389
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI98633.1| hypothetical protein 111O18.20 [Coffea canephora]       82   4e-14
ref|XP_002325643.1| chromatin remodeling complex subunit [Populu...    75   7e-12
ref|XP_002310223.1| chromatin remodeling complex subunit [Populu...    72   6e-11
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    69   4e-10
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    69   4e-10

>gb|AEI98633.1| hypothetical protein 111O18.20 [Coffea canephora]
          Length = 744

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 43/62 (69%), Positives = 45/62 (72%), Gaps = 9/62 (14%)
 Frame = +3

Query: 54  WIQTDISEDDLESVLDRSDLIS---------GSDSASATLKGPGWEVVIPNVTGGVLSTL 206
           WIQTDISEDDLE VLDRSDL++         GSDS    LKGPGWEVVIP   GGVLSTL
Sbjct: 683 WIQTDISEDDLERVLDRSDLVAVSSEQDGKTGSDSTVLPLKGPGWEVVIPTAPGGVLSTL 742

Query: 207 NS 212
           NS
Sbjct: 743 NS 744


>ref|XP_002325643.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222862518|gb|EEF00025.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 719

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/61 (63%), Positives = 44/61 (72%), Gaps = 9/61 (14%)
 Frame = +3

Query: 57  IQTDISEDDLESVLDRSDLISGSDS---------ASATLKGPGWEVVIPNVTGGVLSTLN 209
           IQTDIS++DLE VLDRSDL+ GS S          S  LKGPGWEVV+P  +GGVLSTLN
Sbjct: 659 IQTDISDEDLERVLDRSDLVVGSSSDDIENMAAAVSIPLKGPGWEVVVPTASGGVLSTLN 718

Query: 210 S 212
           S
Sbjct: 719 S 719


>ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853126|gb|EEE90673.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 754

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 9/61 (14%)
 Frame = +3

Query: 57  IQTDISEDDLESVLDRSDLISGS-----DSASAT----LKGPGWEVVIPNVTGGVLSTLN 209
           IQTDIS++DLE +LDRSDL+ GS     +S +AT    LKGPGWEVVIPN  GG+LSTL 
Sbjct: 694 IQTDISDEDLERILDRSDLVVGSSDDDTESIAATGSFPLKGPGWEVVIPNANGGMLSTLY 753

Query: 210 S 212
           S
Sbjct: 754 S 754


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 9/61 (14%)
 Frame = +3

Query: 57  IQTDISEDDLESVLDRSDLI--SGSDSASAT-------LKGPGWEVVIPNVTGGVLSTLN 209
           IQT+IS+ DLE +LDRSDLI  +GSD+  +        LKGPGWEVVIP  TGGVLSTLN
Sbjct: 768 IQTEISDADLERILDRSDLIVPTGSDNEKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLN 827

Query: 210 S 212
           S
Sbjct: 828 S 828


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 9/61 (14%)
 Frame = +3

Query: 57  IQTDISEDDLESVLDRSDLI--SGSDSASAT-------LKGPGWEVVIPNVTGGVLSTLN 209
           IQT+IS+ DLE +LDRSDLI  +GSD+  +        LKGPGWEVVIP  TGGVLSTLN
Sbjct: 762 IQTEISDADLERILDRSDLIVPTGSDNEKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLN 821

Query: 210 S 212
           S
Sbjct: 822 S 822


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