BLASTX nr result

ID: Cephaelis21_contig00034341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034341
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]       69   4e-10
ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thal...    69   4e-10
ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g...    69   4e-10
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...    68   7e-10
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...    68   7e-10

>dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]
          Length = 1962

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = +3

Query: 63  PDTLFLYIEPLSPFGSLLEGMTSNSSMVSWYIVSGRHYIIQVKVFSQRPGAEEIYITE 236
           PDTL LYI P S  G L+       S + WY+VSGR Y+IQ+K+FS RP A EIYITE
Sbjct: 333 PDTLILYISPWSMSGDLITESKPFPSSMHWYVVSGRQYLIQMKIFSGRPDAHEIYITE 390


>ref|NP_198864.2| protein embryo defective 3012 [Arabidopsis thaliana]
           gi|332007169|gb|AED94552.1| protein embryo defective
           3012 [Arabidopsis thaliana]
          Length = 1923

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = +3

Query: 63  PDTLFLYIEPLSPFGSLLEGMTSNSSMVSWYIVSGRHYIIQVKVFSQRPGAEEIYITE 236
           PDTL LYI P S  G L+       S + WY+VSGR Y+IQ+K+FS RP A EIYITE
Sbjct: 333 PDTLILYISPWSMSGDLITESKPFPSSMHWYVVSGRQYLIQMKIFSGRPDAHEIYITE 390


>ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata]
           gi|297340472|gb|EFH70889.1| EMB3012 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1722

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 39/58 (67%)
 Frame = +3

Query: 63  PDTLFLYIEPLSPFGSLLEGMTSNSSMVSWYIVSGRHYIIQVKVFSQRPGAEEIYITE 236
           PDTL LYI P S  G L+       S + WY+VSGR Y+IQ+K+FS RP A EIYITE
Sbjct: 333 PDTLILYISPWSMSGDLITESKPFPSSMHWYVVSGRQYLIQMKIFSGRPDAHEIYITE 390


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
           sativus]
          Length = 1758

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = +3

Query: 63  PDTLFLYIEPLSPFGSLLEGMTSNSSMVSWYIVSGRHYIIQVKVFSQRPGAEEIYITE 236
           P++L LYI PL      +EG   + S  +WYIVSGR Y+IQ+KVFS+ P A+EIYITE
Sbjct: 321 PESLHLYISPLPIVDEPVEGTERSISFANWYIVSGRQYLIQIKVFSRGPDAQEIYITE 378


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
           210-like [Cucumis sativus]
          Length = 2257

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = +3

Query: 63  PDTLFLYIEPLSPFGSLLEGMTSNSSMVSWYIVSGRHYIIQVKVFSQRPGAEEIYITE 236
           P++L LYI PL      +EG   + S  +WYIVSGR Y+IQ+KVFS+ P A+EIYITE
Sbjct: 321 PESLHLYISPLPIVDEPVEGTERSISFANWYIVSGRQYLIQIKVFSRGPDAQEIYITE 378


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