BLASTX nr result

ID: Cephaelis21_contig00034299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034299
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]   215   1e-53
ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containi...   214   2e-53
emb|CBI33251.3| unnamed protein product [Vitis vinifera]              208   2e-51
ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata] g...   205   1e-50
ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thalian...   202   6e-50

>emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
          Length = 490

 Score =  215 bits (547), Expect = 1e-53
 Identities = 110/237 (46%), Positives = 165/237 (69%), Gaps = 2/237 (0%)
 Frame = +3

Query: 174 SADNIERKLLRQGVVPTPKIIRTIRRKELQKLNRRAAKQAAKQGLPTLTESQKQALAEES 353
           + + I+R L+R+GV PTPKII T+R+KE+QK  R++ + A +   PT    + + + EE+
Sbjct: 13  NTEKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQSPT----EDEEVNEEA 68

Query: 354 HFQIIKSEYRSFTNAINGEKKMVGRPWERLEKFKLRELASEKEEYGGGKLKIEHLRELSD 533
           HF+ +K EY   + A+     MVG+PWER      +E+ +   EYGG +LK EHLRELS+
Sbjct: 69  HFRTLKREYTKLSKAL-----MVGKPWERPG---FKEILNGSVEYGGERLKREHLRELSE 120

Query: 534 IMENERKKLHWLLDDDVELENGLLDNETSAWTPPKPCQSEAEAIRIFLEKFSCIEPSVKN 713
           I+E +R ++ WLLDDDVE+E G   NE   W+P +    +A+AIR  +++ +  + ++++
Sbjct: 121 ILE-KRGEVRWLLDDDVEVEQGSSGNERRGWSPARRRGGDADAIRFLVDRLTAADITIRD 179

Query: 714 WKFSRIVKLSGLQFSERQMLKIVEGLGERGKWRNALSLVEWVY--NSKEHRQYKSRF 878
           WKFSR++K SGLQF+ERQ+L+IVE LG RG W++ALS+VEWVY    K++R+YKSRF
Sbjct: 180 WKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHALSVVEWVYTDKDKDNRRYKSRF 236


>ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Cucumis sativus]
           gi|449499902|ref|XP_004160949.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Cucumis sativus]
          Length = 860

 Score =  214 bits (546), Expect = 2e-53
 Identities = 113/258 (43%), Positives = 163/258 (63%), Gaps = 6/258 (2%)
 Frame = +3

Query: 123 MEASTGPSRLXXXXXXXSADNIERKLLRQGVVPTPKIIRTIRRKELQKLNRRAAKQAAKQ 302
           MEA    + +         D I+R LL++GV PTP+I+R++R+KE+QK NR+  + A +Q
Sbjct: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60

Query: 303 GL--PTLTESQKQALAEESHFQIIKSEYRSFTNAINGEKK---MVGRPWERLEKFKLREL 467
               P L+ESQKQ +AEE+HF  ++SEY+ F+ AI  +     MVGRPWERLE+   +EL
Sbjct: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120

Query: 468 ASEKEEYGGGKLKIEHLRELSDIMENER-KKLHWLLDDDVELENGLLDNETSAWTPPKPC 644
              +  Y    LK E LREL  + E  + ++  W LDDDVEL+   L++E   +   K  
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180

Query: 645 QSEAEAIRIFLEKFSCIEPSVKNWKFSRIVKLSGLQFSERQMLKIVEGLGERGKWRNALS 824
           + + E IR  +++ S    S+++WKFSR++  SGLQF+E Q+LKI++ LG +G W+ ALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 825 LVEWVYNSKEHRQYKSRF 878
           +VEWVYN K H   KSRF
Sbjct: 241 VVEWVYNLKSHSHSKSRF 258


>emb|CBI33251.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  208 bits (529), Expect = 2e-51
 Identities = 106/235 (45%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
 Frame = +3

Query: 174 SADNIERKLLRQGVVPTPKIIRTIRRKELQKLNRRAAKQAAKQGLPTLTESQKQALAEES 353
           + + I+R L+R+GV PTPKII T+R+KE+QK  R++ + A +   PT    + + + EE+
Sbjct: 13  NTEKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQSPT----EDEEVNEEA 68

Query: 354 HFQIIKSEYRSFTNAINGEKKMVGRPWERLEKFKLRELASEKEEYGGGKLKIEHLRELSD 533
           HF+ +K EY   + A+     MVG+PWER      +E+ +   EYGG +LK EHLRELS+
Sbjct: 69  HFRTLKREYTKLSKAL-----MVGKPWERPG---FKEILNGSVEYGGERLKREHLRELSE 120

Query: 534 IMENERKKLHWLLDDDVELENGLLDNETSAWTPPKPCQSEAEAIRIFLEKFSCIEPSVKN 713
           I+E +R ++ WLLDDDVE+E G   NE   W+P +    +A+AIR  +++ +  + ++++
Sbjct: 121 ILE-KRGEVRWLLDDDVEVEQGSSGNERRGWSPARRRGGDADAIRFLVDRLTAADITIRD 179

Query: 714 WKFSRIVKLSGLQFSERQMLKIVEGLGERGKWRNALSLVEWVY--NSKEHRQYKS 872
           WKFSR++K SGLQF+ERQ+L+IVE LG RG W+++LS+VEW Y    K++R+YKS
Sbjct: 180 WKFSRVMKQSGLQFTERQLLRIVEELGARGHWKHSLSVVEWAYTDKDKDNRRYKS 234


>ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata]
           gi|297312532|gb|EFH42956.1| EMB1408 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 621

 Score =  205 bits (522), Expect = 1e-50
 Identities = 108/240 (45%), Positives = 161/240 (67%), Gaps = 7/240 (2%)
 Frame = +3

Query: 180 DNIERKLLRQGVVPTPKIIRTIRRKELQKLNRRAAKQAAKQGLPTLTESQKQALAEESHF 359
           + I+R+LL+ GV PTPKI+  +R+KE+QK NRR  ++   +     TE+QKQ++ EE+ F
Sbjct: 24  EKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEA-EVYTEAQKQSMEEEARF 82

Query: 360 QIIKSEYRSFTNAINGEKK-----MVGRPWERLEKFKLRELAS--EKEEYGGGKLKIEHL 518
           Q ++ EY+ FT +I+G+       MVG PWE +E+ KL+EL S   +EE  GG+LK E+L
Sbjct: 83  QTLRREYKQFTRSISGKSGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSGGELKKENL 142

Query: 519 RELSDIMENERKKLHWLLDDDVELENGLLDNETSAWTPPKPCQSEAEAIRIFLEKFSCIE 698
           +EL  I+E   K L W+L+DDV++E   LD E   + P K  ++E EA+R+ +++ S  E
Sbjct: 143 KELKKILE---KDLRWVLEDDVDVEEYDLDKE---FDPAKRWRTEGEAVRVLVDRLSGRE 196

Query: 699 PSVKNWKFSRIVKLSGLQFSERQMLKIVEGLGERGKWRNALSLVEWVYNSKEHRQYKSRF 878
            + K+WKF RI+  SGLQFSE QMLKIV+ LG +  W+ A ++V WVY+ K+ +  +SRF
Sbjct: 197 ITEKHWKFVRIMNQSGLQFSEDQMLKIVDRLGRKNSWKQASAVVHWVYSDKKRKHNRSRF 256


>ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thaliana]
           gi|223635752|sp|Q9FJW6.2|PP451_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g67570, chloroplastic; AltName: Full=Protein DELAYED
           GREENING 1; AltName: Full=Protein EMBRYO DEFECTIVE 1408;
           Flags: Precursor gi|332010978|gb|AED98361.1| delayed
           greening 1 protein [Arabidopsis thaliana]
          Length = 798

 Score =  202 bits (515), Expect = 6e-50
 Identities = 106/240 (44%), Positives = 161/240 (67%), Gaps = 7/240 (2%)
 Frame = +3

Query: 180 DNIERKLLRQGVVPTPKIIRTIRRKELQKLNRRAAKQAAKQGLPTLTESQKQALAEESHF 359
           + I+R+LL+ GV PTPKI+  +R+KE+QK NRR  ++   +     TE+QKQ++ EE+ F
Sbjct: 24  EKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEA-EVYTEAQKQSMEEEARF 82

Query: 360 QIIKSEYRSFTNAINGEKK-----MVGRPWERLEKFKLRELAS--EKEEYGGGKLKIEHL 518
           Q ++ EY+ FT +I+G++      MVG PWE +E+ KL+EL S   +EE   G+LK E+L
Sbjct: 83  QTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSAGELKKENL 142

Query: 519 RELSDIMENERKKLHWLLDDDVELENGLLDNETSAWTPPKPCQSEAEAIRIFLEKFSCIE 698
           +EL  I+E   K L W+LDDDV++E   LD E   + P K  ++E EA+R+ +++ S  E
Sbjct: 143 KELKKILE---KDLRWVLDDDVDVEEFDLDKE---FDPAKRWRNEGEAVRVLVDRLSGRE 196

Query: 699 PSVKNWKFSRIVKLSGLQFSERQMLKIVEGLGERGKWRNALSLVEWVYNSKEHRQYKSRF 878
            + K+WKF R++  SGLQF+E QMLKIV+ LG +  W+ A ++V WVY+ K+ +  +SRF
Sbjct: 197 INEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRF 256


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