BLASTX nr result

ID: Cephaelis21_contig00034273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034273
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72782.1| hypothetical protein VITISV_008015 [Vitis vinifera]    56   1e-12
ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    49   5e-10
ref|NP_188529.2| B3 domain-containing transcription factor VRN1 ...    46   4e-09
dbj|BAJ34355.1| unnamed protein product [Thellungiella halophila]      46   4e-09
ref|XP_002885287.1| hypothetical protein ARALYDRAFT_479415 [Arab...    45   6e-09

>emb|CAN72782.1| hypothetical protein VITISV_008015 [Vitis vinifera]
          Length = 318

 Score = 55.8 bits (133), Expect(2) = 1e-12
 Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
 Frame = -3

Query: 405 LLVPGERKVWPVNCIIYDRKAQIRHGDWKEFVADNRLHFGDVCVFEMPKGT-QMLNVIIY 229
           LLVP  R  WPV C +     +   G W+ FV DNRL  GDVC  EM K T  +L V+I+
Sbjct: 246 LLVPAGR-TWPVKCSVAKTDVKFSRG-WRNFVVDNRLEVGDVCAXEMIKCTGTLLKVVIF 303

Query: 228 RNS*AEEEASGGCLMG 181
           R    + E  G C  G
Sbjct: 304 R----KNEXEGACCSG 315



 Score = 43.5 bits (101), Expect(2) = 1e-12
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -2

Query: 556 SFQRAKTFTSANPFFVCFMQPSYVTEKSSLTFPSSFARENLPK 428
           + +RAK F + NPFF+  MQP+YVT +  L  P  F + +  K
Sbjct: 197 ALRRAKAFKTKNPFFIVTMQPTYVTRRYKLNIPLRFVKRHFEK 239


>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 48.5 bits (114), Expect(2) = 5e-10
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = -3

Query: 384 KVWPVNCIIYDRKAQIRHGDWKEFVADNRLHFGDVCVFEMPKGTQ-MLNVIIYR 226
           K WPV C   D KA++  G W EFV +N L  GDVC+FE+    + +L V ++R
Sbjct: 256 KQWPVRCSFKDGKAKLGQG-WTEFVWENNLEEGDVCIFELIHAKEIVLKVAVFR 308



 Score = 42.4 bits (98), Expect(2) = 5e-10
 Identities = 30/90 (33%), Positives = 42/90 (46%)
 Frame = -2

Query: 712 KIQQETPEDVSSNRHRSRQGITKEDSEETETPDPSTDAKIRTVAEKDKELFLSFQRAKTF 533
           K   E  EDV  +     Q +  + +    T +  T  + R V  ++KE   + + A  F
Sbjct: 152 KRMSENIEDVDKHASPGIQNVKLKSTHVRNTSETLTRRR-RAVTPEEKER--TIRAAHMF 208

Query: 532 TSANPFFVCFMQPSYVTEKSSLTFPSSFAR 443
            S NPFF   ++PSYV     L  PSSFAR
Sbjct: 209 RSDNPFFRVILRPSYVYRGFLLHIPSSFAR 238


>ref|NP_188529.2| B3 domain-containing transcription factor VRN1 [Arabidopsis
           thaliana] gi|75153628|sp|Q8L3W1.1|VRN1_ARATH RecName:
           Full=B3 domain-containing transcription factor VRN1;
           AltName: Full=Protein VERNALIZATION 1
           gi|21734794|gb|AAM76972.1|AF289051_1 reduced
           vernalization response 1 [Arabidopsis thaliana]
           gi|21734796|gb|AAM76973.1|AF289052_1 reduced
           vernalization response 1 [Arabidopsis thaliana]
           gi|89000959|gb|ABD59069.1| At3g18990 [Arabidopsis
           thaliana] gi|110741272|dbj|BAF02186.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|225898655|dbj|BAH30458.1| hypothetical protein
           [Arabidopsis thaliana] gi|332642657|gb|AEE76178.1| B3
           domain-containing transcription factor VRN1 [Arabidopsis
           thaliana]
          Length = 341

 Score = 45.8 bits (107), Expect(2) = 4e-09
 Identities = 40/163 (24%), Positives = 65/163 (39%)
 Frame = -2

Query: 922 EDDDVSVEFLGHIPPSSYHDAKRRKTGTIKKACVQPEDDDSIQILGETPAPXXXXXXXXX 743
           ED+D  V F   + PS   ++          + +Q      ++    TP P         
Sbjct: 127 EDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGR- 185

Query: 742 XXXXXKEADVKIQQETPEDVSSNRHRSRQGITKEDSEETETPDPSTDAKIRTVAEKDKEL 563
                     K +   PE+++S+  R       +D E       S  A+ RTV  +++E 
Sbjct: 186 ----------KKKNADPEEINSSAPRD------DDPENRSKFYESASARKRTVTAEERER 229

Query: 562 FLSFQRAKTFTSANPFFVCFMQPSYVTEKSSLTFPSSFARENL 434
            ++   AKTF   NPFF   ++PSY+     +  PS FA + L
Sbjct: 230 AIN--AAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYL 270



 Score = 42.0 bits (97), Expect(2) = 4e-09
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = -3

Query: 384 KVWPVNCIIYDRKAQIRHGDWKEFVADNRLHFGDVCVFEM 265
           K WPV C+    +A+   G W EF  +N L  GDVCVFE+
Sbjct: 284 KQWPVRCLYKAGRAKFSQG-WYEFTLENNLGEGDVCVFEL 322


>dbj|BAJ34355.1| unnamed protein product [Thellungiella halophila]
          Length = 341

 Score = 45.8 bits (107), Expect(2) = 4e-09
 Identities = 40/163 (24%), Positives = 65/163 (39%)
 Frame = -2

Query: 922 EDDDVSVEFLGHIPPSSYHDAKRRKTGTIKKACVQPEDDDSIQILGETPAPXXXXXXXXX 743
           ED+D  V +   + PS   D+          + +Q      ++    TP P         
Sbjct: 127 EDEDAEVIYPSSVYPSPLPDSTVPANKGYSGSAIQSLFTGPVKAEEATPTPKVPKKRGR- 185

Query: 742 XXXXXKEADVKIQQETPEDVSSNRHRSRQGITKEDSEETETPDPSTDAKIRTVAEKDKEL 563
                     K +   PE+++S+  R       +D E       S  A+ RTV  +++E 
Sbjct: 186 ----------KKKNADPEEINSSAPRD------DDPENRSKFYESASARKRTVTAEERER 229

Query: 562 FLSFQRAKTFTSANPFFVCFMQPSYVTEKSSLTFPSSFARENL 434
            ++   AKTF   NPFF   ++PSY+     +  PS FA + L
Sbjct: 230 AIN--AAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYL 270



 Score = 42.0 bits (97), Expect(2) = 4e-09
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = -3

Query: 384 KVWPVNCIIYDRKAQIRHGDWKEFVADNRLHFGDVCVFEM 265
           K WPV C+    +A+   G W EF  +N L  GDVCVFE+
Sbjct: 284 KQWPVRCLYKAGRAKFSQG-WYEFTLENNLGEGDVCVFEL 322


>ref|XP_002885287.1| hypothetical protein ARALYDRAFT_479415 [Arabidopsis lyrata subsp.
           lyrata] gi|297331127|gb|EFH61546.1| hypothetical protein
           ARALYDRAFT_479415 [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score = 45.1 bits (105), Expect(2) = 6e-09
 Identities = 40/163 (24%), Positives = 65/163 (39%)
 Frame = -2

Query: 922 EDDDVSVEFLGHIPPSSYHDAKRRKTGTIKKACVQPEDDDSIQILGETPAPXXXXXXXXX 743
           ED+D    F   + PS   ++          + +Q     S++    TP P         
Sbjct: 127 EDEDAEFIFPSSVYPSPLPESTVPANKGYAGSAIQSLFTGSVKAEEATPTPKIPKKRGR- 185

Query: 742 XXXXXKEADVKIQQETPEDVSSNRHRSRQGITKEDSEETETPDPSTDAKIRTVAEKDKEL 563
                     K +   PE+++S+  R       +D E       S  A+ RTV  +++E 
Sbjct: 186 ----------KKKNADPEEINSSAPRD------DDPENRSKFYESASARKRTVTAEERER 229

Query: 562 FLSFQRAKTFTSANPFFVCFMQPSYVTEKSSLTFPSSFARENL 434
            ++   AKTF   NPFF   ++PSY+     +  PS FA + L
Sbjct: 230 AIN--AAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYL 270



 Score = 42.0 bits (97), Expect(2) = 6e-09
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = -3

Query: 384 KVWPVNCIIYDRKAQIRHGDWKEFVADNRLHFGDVCVFEM 265
           K WPV C+    +A+   G W EF  +N L  GDVCVFE+
Sbjct: 284 KQWPVRCLYKAGRAKFSQG-WYEFTLENNLGEGDVCVFEL 322


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