BLASTX nr result

ID: Cephaelis21_contig00034006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00034006
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...    78   9e-13
ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ...    73   3e-11
ref|XP_002511689.1| DNA repair and recombination protein radA, p...    72   5e-11
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...    66   3e-09
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...    64   1e-08

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +1

Query: 82  MEVATLPISSSQRAKLISAGYTXXXXXXXXXXXQLARELGVSENEAIGILKVASQRGGVE 261
           ME+A LPIS+SQR KLISAGYT            LA++L +S+NEA+ IL+V SQ   ++
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 262 RTRESYHAIVNGAQTAWD 315
           +  +  HAIVNGAQTAWD
Sbjct: 61  KP-DGSHAIVNGAQTAWD 77


>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
           sativus] gi|449480051|ref|XP_004155785.1| PREDICTED: DNA
           repair protein RAD51 homolog 3-like [Cucumis sativus]
          Length = 346

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/78 (51%), Positives = 51/78 (65%)
 Frame = +1

Query: 82  MEVATLPISSSQRAKLISAGYTXXXXXXXXXXXQLARELGVSENEAIGILKVASQRGGVE 261
           MEV  LPIS++ R KLIS+GYT            LAREL +S NEA  +LK+AS   G++
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 262 RTRESYHAIVNGAQTAWD 315
           R+ +   AIVNGA+TAWD
Sbjct: 61  RS-DGSGAIVNGAETAWD 77


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/78 (48%), Positives = 52/78 (66%)
 Frame = +1

Query: 82  MEVATLPISSSQRAKLISAGYTXXXXXXXXXXXQLARELGVSENEAIGILKVASQRGGVE 261
           MEV+ LP+S+SQR KLI AGYT            LAR+L +S++EA+ ILKVAS+   ++
Sbjct: 1   MEVSRLPLSASQRGKLILAGYTSLSSLSSVSPSDLARDLKISDSEALEILKVASRNSRLD 60

Query: 262 RTRESYHAIVNGAQTAWD 315
              E  HA++NGAQ AW+
Sbjct: 61  -GMEGCHAVINGAQNAWE 77


>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355506214|gb|AES87356.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/78 (41%), Positives = 50/78 (64%)
 Frame = +1

Query: 82  MEVATLPISSSQRAKLISAGYTXXXXXXXXXXXQLARELGVSENEAIGILKVASQRGGVE 261
           ME+  LPIS+S+R KL++AGYT            LAR++ VSE+EA+ IL  A++   ++
Sbjct: 1   MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLARDIEVSESEALEILNFATRSSDLD 60

Query: 262 RTRESYHAIVNGAQTAWD 315
           ++  S   +++G QTAWD
Sbjct: 61  KSSGSNANVIHGGQTAWD 78


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/78 (39%), Positives = 49/78 (62%)
 Frame = +1

Query: 82  MEVATLPISSSQRAKLISAGYTXXXXXXXXXXXQLARELGVSENEAIGILKVASQRGGVE 261
           ME+  LPIS+S+R KL++AGYT            L R++ VSE+EA+ IL  A++   ++
Sbjct: 1   MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLVRDIEVSESEALEILNFATRSNDLD 60

Query: 262 RTRESYHAIVNGAQTAWD 315
           ++  S   +++G QTAWD
Sbjct: 61  KSSGSNTNVIDGGQTAWD 78


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