BLASTX nr result

ID: Cephaelis21_contig00033936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033936
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322614.1| auxin efflux carrier component [Populus tric...   109   2e-22
gb|AAM54034.1|AF515435_1 PIN1-like auxin transport protein [Popu...   109   2e-22
ref|NP_001234220.1| auxin efflux facilitator SlPIN9 [Solanum lyc...   105   5e-21
ref|XP_002282650.1| PREDICTED: probable auxin efflux carrier com...   103   1e-20
emb|CBI32786.3| unnamed protein product [Vitis vinifera]              103   1e-20

>ref|XP_002322614.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222867244|gb|EEF04375.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 588

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   DYGNELGVGAHPKDYDDFGRDEFSFGNRQGANGTDREGPVLSKLGSSSTAELHPKASAS- 178
           DYGN+LG  AH KDYD+FGRDEFSFGNR G NG DR+GPVLSKLGSSSTAELHPK++A+ 
Sbjct: 355 DYGNDLGGVAHHKDYDEFGRDEFSFGNRPGPNGVDRDGPVLSKLGSSSTAELHPKSAANG 414

Query: 179 DIKATSMPPAS 211
           + K T MPP S
Sbjct: 415 EAKPTVMPPTS 425


>gb|AAM54034.1|AF515435_1 PIN1-like auxin transport protein [Populus tremula x Populus
           tremuloides]
          Length = 588

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   DYGNELGVGAHPKDYDDFGRDEFSFGNRQGANGTDREGPVLSKLGSSSTAELHPKASAS- 178
           DYGN+LG  AH KDYD+FGRDEFSFGNR G NG DR+GPVLSKLGSSSTAELHPK++A+ 
Sbjct: 355 DYGNDLGGVAHHKDYDEFGRDEFSFGNRPGPNGVDRDGPVLSKLGSSSTAELHPKSAANG 414

Query: 179 DIKATSMPPAS 211
           + K T MPP S
Sbjct: 415 EAKPTVMPPTS 425


>ref|NP_001234220.1| auxin efflux facilitator SlPIN9 [Solanum lycopersicum]
           gi|298286390|dbj|BAJ09454.1| auxin efflux carrier
           [Solanum lycopersicum] gi|312983222|gb|ADR30407.1| auxin
           efflux facilitator SlPIN9 [Solanum lycopersicum]
          Length = 594

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/70 (70%), Positives = 57/70 (81%)
 Frame = +2

Query: 2   DYGNELGVGAHPKDYDDFGRDEFSFGNRQGANGTDREGPVLSKLGSSSTAELHPKASASD 181
           DYGNELGVGAHPKDYD+FGR+EF+FGN+Q  NG DREGPV+    SSST EL PK +  +
Sbjct: 365 DYGNELGVGAHPKDYDEFGREEFTFGNKQNLNGNDREGPVVR---SSSTTELRPKIAQEE 421

Query: 182 IKATSMPPAS 211
            KAT+MPPAS
Sbjct: 422 TKATAMPPAS 431


>ref|XP_002282650.1| PREDICTED: probable auxin efflux carrier component 1c-like isoform
           2 [Vitis vinifera]
          Length = 597

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/70 (72%), Positives = 55/70 (78%)
 Frame = +2

Query: 2   DYGNELGVGAHPKDYDDFGRDEFSFGNRQGANGTDREGPVLSKLGSSSTAELHPKASASD 181
           DYGNELG   H KDYD+FG+DEFSFGNR   NG DREGP +SKLGSSST ELHPK +A  
Sbjct: 366 DYGNELGGVPHTKDYDEFGQDEFSFGNRASVNGGDREGPTMSKLGSSSTTELHPK-TAPQ 424

Query: 182 IKATSMPPAS 211
            K TSMPPAS
Sbjct: 425 SKPTSMPPAS 434


>emb|CBI32786.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/70 (72%), Positives = 55/70 (78%)
 Frame = +2

Query: 2   DYGNELGVGAHPKDYDDFGRDEFSFGNRQGANGTDREGPVLSKLGSSSTAELHPKASASD 181
           DYGNELG   H KDYD+FG+DEFSFGNR   NG DREGP +SKLGSSST ELHPK +A  
Sbjct: 324 DYGNELGGVPHTKDYDEFGQDEFSFGNRASVNGGDREGPTMSKLGSSSTTELHPK-TAPQ 382

Query: 182 IKATSMPPAS 211
            K TSMPPAS
Sbjct: 383 SKPTSMPPAS 392


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