BLASTX nr result

ID: Cephaelis21_contig00033830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033830
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  104   3e-39
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   2e-23
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               109   5e-22
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   109   5e-22
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   104   2e-20

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  104 bits (259), Expect(2) = 3e-39
 Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
 Frame = -2

Query: 634 AQELISKYARKRVSPRCLIKVDIRKAYDSVSWPFLRSTMVGLVFPPTFVDWVMECVQTAS 455
           A EL+ +Y R   S R ++K+D+RKA+D+VSW F+   M  L  P TFV WV  C++T  
Sbjct: 25  ATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVCMETPK 84

Query: 454 YSVRINGSIYGYFQGRRGLRQGDPIS-FVFV 365
           +SV ING + GYF+GRRGLRQGDP+S ++F+
Sbjct: 85  FSVSINGELAGYFKGRRGLRQGDPLSPYLFI 115



 Score = 84.0 bits (206), Expect(2) = 3e-39
 Identities = 44/117 (37%), Positives = 68/117 (58%)
 Frame = -3

Query: 372 YLYVVCAEYFSSMLIRESRENSFRFHPGCGQLRITHLSYADDMMLLSRGDPPSVRTLWET 193
           YL+++  E  S ML R + E+    HP C    ITHL++ADD+M+ + G+  S+  +  T
Sbjct: 112 YLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNT 171

Query: 192 LLTFGDISGLRANPQKSSIFMAGVCDRDSKDILALTGIQRGALPVLYLGIPLMAGKL 22
           L +F   SGL  N +K+ IF+ G+   ++  + A+ G  RG LPV YLG+ L   +L
Sbjct: 172 LDSFSRASGLYLNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRL 228


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  114 bits (285), Expect = 2e-23
 Identities = 55/94 (58%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = -2

Query: 634 AQELISKYARKRVSPRCLIKVDIRKAYDSVSWPFLRSTMVGLVFPPTFVDWVMECVQTAS 455
           A ELI  Y RK +SPRC++KVDIRKAYDSV W FL + +    FP  FV W+MECV T S
Sbjct: 563 ASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVS 622

Query: 454 YSVRINGSIYGYFQGRRGLRQGDPIS-FVFVCCL 356
           YSV +NG     FQ R+GLRQGDP+S F+F  C+
Sbjct: 623 YSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCM 656



 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 74/263 (28%), Positives = 113/263 (42%), Gaps = 16/263 (6%)
 Frame = -3

Query: 741  ISKILTPKMAKVLPHIIHEAQSAFVEDMSMMENIHQPRSSLANMRGRGYHLDALS----- 577
            ISK+LT +M  ++  +++EAQS F+    + +NI      LA+   RGY    +S     
Sbjct: 527  ISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNI-----LLASELIRGYTRKHMSPRCIM 581

Query: 576  -----------RWIFGRPMTLLAGLSSGVPWWVLFFPRPSWTGLWSVYRRRHTQSGLMAA 430
                        W F   +    G  S    W++       T  +SV           A 
Sbjct: 582  KVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVS---TVSYSVLVNGIPTQPFQAR 638

Query: 429  FMVISRVDVGCGRVTLFLSYLYVVCAEYFSSMLIRESRENSFRFHPGCGQLRITHLSYAD 250
                     G  +      +L+ +C EY S  L        F FHP C +L ITHL +AD
Sbjct: 639  --------KGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFAD 690

Query: 249  DMMLLSRGDPPSVRTLWETLLTFGDISGLRANPQKSSIFMAGVCDRDSKDILALTGIQRG 70
            D+++  R D  S+  +      F   SGL A+ +KS+I+  GV D  ++++     +Q G
Sbjct: 691  DLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLG 750

Query: 69   ALPVLYLGIPLMAGKLQVIYSRP 1
             LP  YLG+PL + KL     +P
Sbjct: 751  ELPFRYLGVPLTSKKLTYAQCKP 773


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  109 bits (273), Expect = 5e-22
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 16/256 (6%)
 Frame = -3

Query: 741 ISKILTPKMAKVLPHIIHEAQSAFVEDMSMMENIHQPRSSLANMRGRGYHLDALS----- 577
           ISKI+  ++  +LP  I E QSAFV+D  ++EN+      LA    + YH D++S     
Sbjct: 189 ISKIIANRLKLLLPRFIAENQSAFVKDRLLIENL-----LLATELVKDYHKDSISARCAI 243

Query: 576 -----------RWIFGRPMTLLAGLSSGVPWWVLFFPRPSWTGLWSVYRRRHTQSGLMAA 430
                      +W F     +    S     W+        T  +SV         L+  
Sbjct: 244 KIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCIT---TASFSV----QVNGDLVGY 296

Query: 429 FMVISRVDVGCGRVTLFLSYLYVVCAEYFSSMLIRESRENSFRFHPGCGQLRITHLSYAD 250
           F     +  GC        YL+V+C +  S ML + +    F FHP C +L +THLS+AD
Sbjct: 297 FQSKRGLRQGCS----LSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFAD 352

Query: 249 DMMLLSRGDPPSVRTLWETLLTFGDISGLRANPQKSSIFMAGVCDRDSKDILALTGIQRG 70
           D+M+LS G   S+  + E    F   SGLR + +KS+++MAGV     ++I A      G
Sbjct: 353 DLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVG 412

Query: 69  ALPVLYLGIPLMAGKL 22
            LPV YLG+PL+  +L
Sbjct: 413 QLPVRYLGLPLVTKRL 428


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  109 bits (273), Expect = 5e-22
 Identities = 48/94 (51%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
 Frame = -2

Query: 634 AQELISKYARKRVSPRCLIKVDIRKAYDSVSWPFLRSTMVGLVFPPTFVDWVMECVQTAS 455
           + EL+  Y+RK +SPRC++K+D++KAY+SV WPF++  M+ L F   FV+WVM C+ TAS
Sbjct: 246 SHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYKFVNWVMGCLTTAS 305

Query: 454 YSVRINGSIYGYFQGRRGLRQGDPIS-FVFVCCL 356
           Y+  ING +   F  ++GLRQGDPIS ++FV C+
Sbjct: 306 YTFNINGDLTRPFAAKKGLRQGDPISPYLFVICM 339



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
 Frame = -3

Query: 741 ISKILTPKMAKVLPHIIHEAQSAFVEDMSMMENIHQPRSSLANMRGRGYHLDALSR---- 574
           ISKILT +M  VL  ++ E QSAFV+   + +NI      + +   +G     + +    
Sbjct: 210 ISKILTSRMQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQ 269

Query: 573 -------WIFGRPMTLLAGLSSGVPWWVLFFPRPSWTGLWSVYRRRHTQSGLMAAFMVIS 415
                  W F + + L  G S     WV+        G  +        +G +       
Sbjct: 270 KAYNSVEWPFIKHLMLELGFSYKFVNWVM--------GCLTTASYTFNINGDLTRPFAAK 321

Query: 414 RVDVGCGRVTLFLSYLYVVCAEYFSSMLIRESRENSFRFHPGCGQLRITHLSYADDMMLL 235
           +   G  +      YL+V+C EY +  LI+  +  +FRFHP C +L + H+ + DD++L 
Sbjct: 322 K---GLRQGDPISPYLFVICMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLF 378

Query: 234 SRGDPPSVRTLWETLLTFGDIS 169
           SRGD  SV  L+E    F   S
Sbjct: 379 SRGDVDSVSQLFEAFSLFSAAS 400


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  104 bits (260), Expect = 2e-20
 Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = -2

Query: 634 AQELISKYARKRVSPRCLIKVDIRKAYDSVSWPFLRSTMVGLVFPPTFVDWVMECVQTAS 455
           A ELI  Y R+ VSPRC+IKVDIRKAYDSV W FL S +  L FP  F+ W+M CV+T S
Sbjct: 566 ATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVS 625

Query: 454 YSVRINGSIYGYFQGRRGLRQGDPIS-FVF 368
           YS+ +NG     F  ++GLRQGDP+S F+F
Sbjct: 626 YSILLNGIPSIPFDAQKGLRQGDPLSPFLF 655



 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 16/263 (6%)
 Frame = -3

Query: 741  ISKILTPKMAKVLPHIIHEAQSAFVEDMSMMENIHQPRSSLANMRGRGYHLDALS----- 577
            ISKILT ++  V+  ++  AQ+ F+ +  + +NI      LA    RGY+   +S     
Sbjct: 530  ISKILTKRLQAVITEVVDCAQTGFIPERHIGDNI-----LLATELIRGYNRRHVSPRCVI 584

Query: 576  -----------RWIFGRPMTLLAGLSSGVPWWVLFFPRPSWTGLWSVYRRRHTQSGLMAA 430
                        W+F   M    G  S    W++   +   T  +S+         L   
Sbjct: 585  KVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVK---TVSYSIL--------LNGI 633

Query: 429  FMVISRVDVGCGRVTLFLSYLYVVCAEYFSSMLIRESRENSFRFHPGCGQLRITHLSYAD 250
              +      G  +      +L+ +  EY S  +    ++  F FHP C ++++THL +AD
Sbjct: 634  PSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFAD 693

Query: 249  DMMLLSRGDPPSVRTLWETLLTFGDISGLRANPQKSSIFMAGVCDRDSKDILALTGIQRG 70
            D+++ +R D  S+  +     +F   SGL+A+ +KS I+  GVC  +++ +     +  G
Sbjct: 694  DLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIG 753

Query: 69   ALPVLYLGIPLMAGKLQVIYSRP 1
            +LP  YLG+PL + KL     +P
Sbjct: 754  SLPFRYLGVPLASKKLNFSQCKP 776


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