BLASTX nr result

ID: Cephaelis21_contig00033774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033774
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    84   2e-14
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002514227.1| zinc finger protein, putative [Ricinus commu...    78   2e-12
ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    77   3e-12
ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|2...    76   4e-12

>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 43/88 (48%), Positives = 53/88 (60%)
 Frame = -1

Query: 483 FDLDMALSMLTMEENHIRTKLLEKKAFDQAQLSEMPIVAAVGECVVCMEAFQSCVGGKQV 304
           FDLD+A++ +        T  + K     + +S MP V AV  C VC E FQS  GGKQ+
Sbjct: 20  FDLDLAITAVD------DTSEISKST---SMVSTMPTVTAVDACTVCREGFQSGEGGKQL 70

Query: 303 PCGHVFHSTCIAQWLSDHNSCPLCRSVV 220
           PCGH +H+ CIA WLS  NSCPLCR  V
Sbjct: 71  PCGHFYHAGCIASWLSLRNSCPLCRCSV 98


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 43/88 (48%), Positives = 53/88 (60%)
 Frame = -1

Query: 483 FDLDMALSMLTMEENHIRTKLLEKKAFDQAQLSEMPIVAAVGECVVCMEAFQSCVGGKQV 304
           FDLD+A++ +        T  + K     + +S MP V AV  C VC E FQS  GGKQ+
Sbjct: 86  FDLDLAITAVD------DTSEISKST---SMVSTMPTVTAVDACTVCREGFQSGEGGKQL 136

Query: 303 PCGHVFHSTCIAQWLSDHNSCPLCRSVV 220
           PCGH +H+ CIA WLS  NSCPLCR  V
Sbjct: 137 PCGHFYHAGCIASWLSLRNSCPLCRCSV 164


>ref|XP_002514227.1| zinc finger protein, putative [Ricinus communis]
           gi|223546683|gb|EEF48181.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 109

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 8/95 (8%)
 Frame = -1

Query: 477 LDMALSM---LTMEENHIRTKLLEKKAFDQAQLSEMPIVAAVGE-----CVVCMEAFQSC 322
           +D++  M   LT+  N      L + +   + ++ MP+V+   E     C VCME FQS 
Sbjct: 18  IDVSFDMEECLTLPHN-----FLHQISVSNSLVANMPMVSVSTEDDDSVCSVCMEGFQSD 72

Query: 321 VGGKQVPCGHVFHSTCIAQWLSDHNSCPLCRSVVF 217
           +GGKQV CGHV+H+ CI+ WLS+ +SCPLCR  +F
Sbjct: 73  MGGKQVQCGHVYHAACISSWLSNSSSCPLCRFNIF 107


>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = -1

Query: 495 MEGMFDLDMALSMLTMEENHIRTKLLEKKAFDQAQLSEMPIVAAVGE-CVVCMEAFQSCV 319
           +E MFDLD  L+    +  +  T +    A     ++E+P VAA  + C VCME F    
Sbjct: 15  IESMFDLDTVLTGAD-DFYYFHTVV----APPPVMVAELPTVAAADDVCAVCMEDFLPDE 69

Query: 318 GGKQVPCGHVFHSTCIAQWLSDHNSCPLCR 229
           GGKQ+PCGHV+H +C++ WLS  +SCPLCR
Sbjct: 70  GGKQIPCGHVYHQSCLSSWLSIRDSCPLCR 99


>ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|222832065|gb|EEE70542.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
 Frame = -1

Query: 483 FDLDMALSMLTMEENHIRTKLLEKKAFDQAQL-SEMPIVAAVGE--CVVCMEAFQSCVGG 313
           FDLD AL   T+ +N     L ++  +  + + ++MP     G+  C VCME FQS +GG
Sbjct: 15  FDLDEAL---TLPQN-----LSQQITYSNSTIVADMPTALTTGDAVCAVCMEGFQSGIGG 66

Query: 312 KQVPCGHVFHSTCIAQWLSDHNSCPLCR 229
           K+VPCGHV+H  CI+  LS  +SCPLCR
Sbjct: 67  KKVPCGHVYHEACISALLSHRHSCPLCR 94


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