BLASTX nr result

ID: Cephaelis21_contig00033733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033733
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   7e-11
ref|XP_002465521.1| hypothetical protein SORBIDRAFT_01g040440 [S...    58   1e-09
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    51   2e-09
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   2e-09
ref|XP_002459639.1| hypothetical protein SORBIDRAFT_02g007880 [S...    54   2e-09

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 59.7 bits (143), Expect(2) = 7e-11
 Identities = 29/103 (28%), Positives = 53/103 (51%)
 Frame = +1

Query: 244  GHRKRDYFQHLVDKFDKQLVGWQGQFLSLGGRIFLIRHVLTTIPPFVFSTIEPPMGVIRK 423
            G  K+  F  L+D+  K+L GW+ + LS  G+  L++ V+  IP ++    + P+ +I+K
Sbjct: 762  GRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQK 821

Query: 424  LEHLCSRFLWRDSAGSLCRVWPTWHGVASLFLKMALGFEILVL 552
            ++   +RF W  S       W  W  + +L     +GF+ L +
Sbjct: 822  IQSAMARFWWGSSDTQRKIHWKNWDSMCNLKCFGGMGFKDLTI 864



 Score = 33.1 bits (74), Expect(2) = 7e-11
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +3

Query: 3   HLAFADDLVVFTRGFCHSI*SLFQLLGQFEVATYQNANLQK 125
           HL FADD ++FTR        +  +L Q+E+A+ Q  N +K
Sbjct: 682 HLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEK 722


>ref|XP_002465521.1| hypothetical protein SORBIDRAFT_01g040440 [Sorghum bicolor]
           gi|241919375|gb|EER92519.1| hypothetical protein
           SORBIDRAFT_01g040440 [Sorghum bicolor]
          Length = 254

 Score = 58.2 bits (139), Expect(2) = 1e-09
 Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +1

Query: 262 YFQHLVDKFDKQLVGWQGQFLSLGGRIFLIRHVLTTIPPFVFSTIEPPMGVIRKLEHLCS 441
           + Q++ D+   ++ GWQG+ +S+ GR  LI+ V+T  P ++ + I+PP   I++++ L  
Sbjct: 61  HLQYIQDRAKGKVEGWQGRLISIAGRRELIKSVITAQPVYLMTCIKPPKRFIKEIDKLRR 120

Query: 442 RFLWR---DSAGSLCRV 483
           RFLW    D  G  C+V
Sbjct: 121 RFLWAGHGDLTGGKCKV 137



 Score = 30.8 bits (68), Expect(2) = 1e-09
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
 Frame = +3

Query: 480 GLAYLAW--CCKPVPENGLGFRDFSTTVRAYSCKL-W*KWHTRVRLW 611
           G   +AW   C+PV   GLG +D     R+   +  W  W +R R W
Sbjct: 133 GKCKVAWQIVCRPVENGGLGIKDLECFSRSLRLRWPWFAWDSRERPW 179


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 51.2 bits (121), Expect(2) = 2e-09
 Identities = 26/92 (28%), Positives = 46/92 (50%)
 Frame = +1

Query: 274  LVDKFDKQLVGWQGQFLSLGGRIFLIRHVLTTIPPFVFSTIEPPMGVIRKLEHLCSRFLW 453
            L++K   ++  W+ +FLS  GR+ L+  V++++  F  S    P   IR++E + + FLW
Sbjct: 1044 LLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLW 1103

Query: 454  RDSAGSLCRVWPTWHGVASLFLKMALGFEILV 549
              +  +  +    WH V     +  LG   LV
Sbjct: 1104 SGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLV 1135



 Score = 36.6 bits (83), Expect(2) = 2e-09
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 3    HLAFADDLVVFTRGFCHSI*SLFQLLGQFEVATYQNANLQKKVPSLFPSLLPLRQCA 173
            HL FADD++VF+ G  HS+  +  +   F  A +   N+  +  +LF + +    CA
Sbjct: 955  HLCFADDIMVFSAGSAHSLEGVLAIFKDF--AAFSGLNISLEKSTLFMASISSETCA 1009


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 54.7 bits (130), Expect(2) = 2e-09
 Identities = 27/103 (26%), Positives = 51/103 (49%)
 Frame = +1

Query: 244  GHRKRDYFQHLVDKFDKQLVGWQGQFLSLGGRIFLIRHVLTTIPPFVFSTIEPPMGVIRK 423
            G  K+  F+ L+D+  K+L GW+ + LS  G+  LI+ V+  +P ++    + P+ VI++
Sbjct: 765  GRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQE 824

Query: 424  LEHLCSRFLWRDSAGSLCRVWPTWHGVASLFLKMALGFEILVL 552
            +    +RF W          W +W  +        +GF+ L +
Sbjct: 825  IHSAMARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGFKDLAV 867



 Score = 33.1 bits (74), Expect(2) = 2e-09
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 3   HLAFADDLVVFTRGFCHSI*SLFQLLGQFEVATYQNANLQK 125
           HL FADD ++FTR       ++  +L ++E A+ Q  N +K
Sbjct: 685 HLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEK 725


>ref|XP_002459639.1| hypothetical protein SORBIDRAFT_02g007880 [Sorghum bicolor]
           gi|241923016|gb|EER96160.1| hypothetical protein
           SORBIDRAFT_02g007880 [Sorghum bicolor]
          Length = 475

 Score = 53.9 bits (128), Expect(2) = 2e-09
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
 Frame = +1

Query: 244 GHRKRDYFQHLVDKFDKQLVGWQGQFLSLGGRIFLIRHVLTTIPPFVFSTIEPPMGVIRK 423
           G  K  + Q  VDK   +L GWQG+ L+  GR  L+  VL++IP ++ ++++ P  +   
Sbjct: 136 GRLKMVHVQGTVDKSRTKLAGWQGRLLNPAGRRELVSSVLSSIPTYLMASMKVPRQLKED 195

Query: 424 LEHLCSRFLW---RDSAGSLCRV-WPT 492
           ++ +  RFLW   ++  G  C+V W T
Sbjct: 196 IDKIRRRFLWAGDKELTGGKCKVAWTT 222



 Score = 33.9 bits (76), Expect(2) = 2e-09
 Identities = 25/66 (37%), Positives = 37/66 (56%)
 Frame = +3

Query: 12  FADDLVVFTRGFCHSI*SLFQLLGQFEVATYQNANLQKKVPSLFPSLLPLRQCAGSGNLL 191
           +ADD V+F       + +LF +L QF  AT    NL+K       S+ P+R CAG+ NL 
Sbjct: 60  YADDAVIFINPVKEEVQALFGILEQFGSATGLKLNLEK------CSVAPIR-CAGT-NLD 111

Query: 192 EYLKAF 209
           + L++F
Sbjct: 112 QILESF 117


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