BLASTX nr result

ID: Cephaelis21_contig00033541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033541
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329502.1| BED finger-nbs-lrr resistance protein [Popul...    59   5e-07
ref|XP_002325344.1| BED finger-nbs-lrr resistance protein [Popul...    59   5e-07
ref|XP_002325343.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002330398.1| BED finger-nbs-lrr resistance protein [Popul...    56   3e-06
ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichoca...    56   3e-06

>ref|XP_002329502.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870182|gb|EEF07313.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 979

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
 Frame = +3

Query: 6    LRKSLQKLERLCVVGCEELEEIVANNDDDGGEAIIFPPSSCQSTSFISHEXXXXXXXXXX 185
            L  SL  LE++ V GCE++EEI+    D+  E ++    S  +  F              
Sbjct: 842  LLPSLVNLEQIIVYGCEKMEEIIWTRSDE--EDVVGEEESSSNIEF-----KLPKLRILD 894

Query: 186  XXXXPRLENVCGPTTIIGGDGSIRFLLSICPKLKRLPAFSSTIE----------ITSRIY 335
                P+L+++C    I   D     L+S C +LKR+  F   +E          +   IY
Sbjct: 895  LYDLPKLKSICSAKLIC--DSLEEILVSYCQELKRMGIFPQLLENGQPSPPPSLVRICIY 952

Query: 336  GSKEWWNS-LEWKNPSDKDTLQPY 404
              KEWW S +EW++P+ KD L P+
Sbjct: 953  -PKEWWESVVEWEHPNTKDVLLPF 975


>ref|XP_002325344.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862219|gb|EEE99725.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1176

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
 Frame = +3

Query: 3    LLRKSLQKLERLCVVGCEELEEIVANNDDDGGEAIIFPPSSCQSTSFISHEXXXXXXXXX 182
            LL  +L+ LE+L V  CE++EEI+   D++     I   SS   T FI            
Sbjct: 1039 LLLPNLKNLEKLAVEECEKMEEIIGTTDEE-----ISSSSSNPITKFI-----LPKLRIL 1088

Query: 183  XXXXXPRLENVCGPTTIIGGDGSIRFL-LSICPKLKRLPAFSSTIE---------ITSRI 332
                 P L+++CG   I     S+ ++ +  C KL+R P     +E         + S  
Sbjct: 1089 RLKYLPELKSICGAKVIC---DSLEYIEVDTCEKLERFPICLPLLENGQPSPLPSLRSIA 1145

Query: 333  YGSKEWWNSL-EWKNPSDKDTLQPY 404
               KEWW SL EW++P+ KD L P+
Sbjct: 1146 IYPKEWWESLAEWEHPNAKDVLLPF 1170


>ref|XP_002325343.1| predicted protein [Populus trichocarpa] gi|222862218|gb|EEE99724.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
 Frame = +3

Query: 3   LLRKSLQKLERLCVVGCEELEEIVANNDDDGGEAIIFPPSSCQSTSFISHEXXXXXXXXX 182
           +L  +L+ LE+L V  CE++EEI+   D++     I   SS   T FI            
Sbjct: 453 VLLPNLKNLEKLVVEECEKMEEIIGPTDEE-----ISSSSSNPITKFI-----LPKLKSL 502

Query: 183 XXXXXPRLENVCGPTTIIGGDGSIRFLLSICPKLKRLPAF---------SSTIEITSRIY 335
                P L+++CG   I   D      +  C KLKR+P           S  + + + + 
Sbjct: 503 RLKYLPELKSICGAKVIC--DSLEEIKVDTCEKLKRIPICLPLLENGQPSPPLSLQNIVA 560

Query: 336 GSKEWWNS-LEWKNPSDKDTLQPY 404
             +EWW+S +EW++P+ KD L P+
Sbjct: 561 YPEEWWDSVVEWEHPNAKDVLLPF 584


>ref|XP_002330398.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222871783|gb|EEF08914.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 901

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
 Frame = +3

Query: 3    LLRKSLQKLERLCVVGCEELEEIVANNDD--DGGEAIIFPPSSCQSTSFISHEXXXXXXX 176
            +L  +L  LE + V  C+++EEI+    D   G E+     SSC+S  F           
Sbjct: 741  VLLPNLLNLEMISVERCDKMEEIIETRVDWVMGEES----SSSCRSIEF-----NLPKLR 791

Query: 177  XXXXXXXPRLENVCGPTTIIGGDGSIRFLLSICPKLKRLPAFSSTIE--------ITSRI 332
                   P L+++C    I     +I  ++  CPKLKR+P     ++            I
Sbjct: 792  HLSFILLPELKSICRENLICSSLQTI--IVRDCPKLKRMPLCLPVLDNGRPSPPPSLEEI 849

Query: 333  Y-GSKEWWNSLEWKNPSDKDTLQPY 404
            Y   KEWW S+EW +P+ KD L P+
Sbjct: 850  YVDPKEWWESVEWDHPNSKDALLPF 874


>ref|XP_002325315.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862190|gb|EEE99696.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1199

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
 Frame = +3

Query: 3    LLRKSLQKLERLCVVGCEELEEIVANNDDDGGEAIIFPPSSCQSTSFISHEXXXXXXXXX 182
            +L  +L  LER+ V  CE++EEI+   D++          S  S S +  E         
Sbjct: 1077 VLLSNLMYLERIQVQHCEKMEEIIGTTDEE----------SSSSNSIM--EFILPKFRIL 1124

Query: 183  XXXXXPRLENVCGPTTIIGGDGSIRFLLSICPKLKRLPAFSSTIEITSRIYGSKEWWNS- 359
                 P L+++C    I   D     ++  C KL+RLP       +       KEWW S 
Sbjct: 1125 RLINLPELKSICSAKLIC--DSLEEIIVDNCQKLRRLPIRLLPPSLKKIEVYPKEWWESV 1182

Query: 360  LEWKNPSDKDTLQPY 404
            +EW+NP+ K+ L P+
Sbjct: 1183 VEWENPNAKEVLSPF 1197


Top