BLASTX nr result

ID: Cephaelis21_contig00033414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033414
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    64   1e-08
ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group] g...    62   5e-08
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]      62   5e-08
emb|CAN69504.1| hypothetical protein VITISV_008507 [Vitis vinifera]    62   6e-08
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    60   2e-07

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 25/50 (50%), Positives = 39/50 (78%)
 Frame = -3

Query: 153 KKMYWQQKSRVQWLKEGDKNTKFFHASTVQRRRRNCIEKLLNGLGEECTS 4
           ++ +WQ+KSR+ W++ GD+NTK+FHA+T  RR +N I+KL++  G E TS
Sbjct: 332 EEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTS 381


>ref|NP_001174443.1| Os05g0434000 [Oryza sativa Japonica Group]
           gi|255676397|dbj|BAH93171.1| Os05g0434000 [Oryza sativa
           Japonica Group]
          Length = 1478

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
 Frame = -3

Query: 270 RKRFKSSRIPWKQCRRQVVT---VIGRNGIYCKLCSRRPTGKKKMYWQQKSRVQWLKEGD 100
           +KR K+ R   ++CRR+ ++   V   + +  KL   R   ++ +YW+Q++   WL +GD
Sbjct: 641 KKRVKNLRKELEKCRREPISNRQVNREHLLRYKL--ERLLDQQHIYWKQRAHSTWLTKGD 698

Query: 99  KNTKFFHASTVQRRRRNCIEKLLNGLG 19
           +NTKFFHA   ++++RN I+KL +G G
Sbjct: 699 RNTKFFHAQASEKKKRNTIQKLQDGHG 725


>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1264

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
 Frame = -3

Query: 270 RKRFKSSRIPWKQCRRQVVT---VIGRNGIYCKLCSRRPTGKKKMYWQQKSRVQWLKEGD 100
           +KR K+ R   ++CRR+ ++   V   + +  KL   R   ++ +YW+Q++   WL +GD
Sbjct: 641 KKRVKNLRKELEKCRREPISNRQVNREHLLRYKL--ERLLDQQHIYWKQRAHSTWLTKGD 698

Query: 99  KNTKFFHASTVQRRRRNCIEKLLNGLG 19
           +NTKFFHA   ++++RN I+KL +G G
Sbjct: 699 RNTKFFHAQASEKKKRNTIQKLQDGHG 725


>emb|CAN69504.1| hypothetical protein VITISV_008507 [Vitis vinifera]
          Length = 522

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/45 (57%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = -3

Query: 153 KKMYWQQKSRVQWLKEGDKNTKFFHASTVQRRRRNCIEKL-LNGL 22
           K++ W+QKSR  WLKEGDKNT+FFH     +R+RNC++K+ +NGL
Sbjct: 239 KEISWRQKSRETWLKEGDKNTRFFHRMANSKRKRNCLKKIKINGL 283


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = -3

Query: 156 KKKMYWQQKSRVQWLKEGDKNTKFFHASTVQRRRRNCIEKLLNGLGEECTS 4
           ++++ W+Q+SR+ WL EGD NTKFFH    +RR RN I+KL    G ECT+
Sbjct: 341 QEEIMWRQRSRITWLHEGDSNTKFFHQRASRRRIRNRIDKLNRPDGSECTN 391


Top