BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033400
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH...    88   6e-16
ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...    87   1e-15
gb|AAF87866.1|AC022520_10 Unknown protein [Arabidopsis thaliana]       86   3e-15
ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi...    86   3e-15
ref|XP_002891729.1| hypothetical protein ARALYDRAFT_314636 [Arab...    80   1e-13

>ref|XP_004146247.1| PREDICTED: putative RNA-binding protein YlmH-like [Cucumis sativus]
           gi|449495519|ref|XP_004159865.1| PREDICTED: putative
           RNA-binding protein YlmH-like [Cucumis sativus]
          Length = 319

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +1

Query: 115 SLRTALH--SFVFPGAIGTKDKFHYSRPLLPTTPLKSSALSICQLVQASKTDAEVLLKGV 288
           SLR A    SF  P A+   ++  ++    P++PL +S   ICQLVQA K D +VLL GV
Sbjct: 13  SLRRAAQFSSFRRPLALNL-NRLCFNEARFPSSPLGTSG--ICQLVQAVKGDIDVLLNGV 69

Query: 289 GDKDSVEDVKXXXXXXXXXXXXXXXXHTGFLTPPVLNESVKALKKMAEIKLVAQGGYPE 465
           GDK  + DVK                HT FLTPPV+ ES+ A++K+A++K +AQGGYPE
Sbjct: 70  GDKGVIVDVKQILVMAKRSLSRREVLHTNFLTPPVVKESMLAIQKLADVKAIAQGGYPE 128


>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
           gi|302142996|emb|CBI20291.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 52/119 (43%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
 Frame = +1

Query: 118 LRTALHSFVFPGAIGTKDKFHYSRPLLP---TTPLKSSALSICQLVQASKTDAEVLLKGV 288
           LR ALHSF+        +   Y + L     +T L SSA  +C L QA K DA  LLKGV
Sbjct: 12  LRKALHSFLPLRLTHINNTLFYYKNLRSFPLSTHLNSSASGMCHLAQAMKGDANSLLKGV 71

Query: 289 GDKDSVEDVKXXXXXXXXXXXXXXXXHTGFLTPPVLNESVKALKKMAEIKLVAQGGYPE 465
            D+ ++E VK                HT FLTPPVL ES+  L+K+A++K VAQGGYP+
Sbjct: 72  ADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIVLEKLADMKAVAQGGYPQ 130


>gb|AAF87866.1|AC022520_10 Unknown protein [Arabidopsis thaliana]
          Length = 773

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +1

Query: 118 LRTALHSFVFPGAIGTKDKFHYSRPLLPTT-PLKSSALSICQLVQASKTDAEVLLKGVGD 294
           LR A  S      + T  K   +   +PT+ PL+ SAL  C   +A K D + LLKGVGD
Sbjct: 465 LRLAFRSVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIKGDVDFLLKGVGD 524

Query: 295 KDSVEDVKXXXXXXXXXXXXXXXXHTGFLTPPVLNESVKALKKMAEIKLVAQGGYPE 465
           +   ++VK                HT FLTPP++ ESV  L+K A++K+VAQGGYPE
Sbjct: 525 QAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVAQGGYPE 581


>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
           gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
           thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
           [Arabidopsis thaliana] gi|27311617|gb|AAO00774.1|
           Unknown protein [Arabidopsis thaliana]
           gi|30984534|gb|AAP42730.1| At1g53120 [Arabidopsis
           thaliana] gi|332194772|gb|AEE32893.1| RNA-binding S4
           domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
 Frame = +1

Query: 118 LRTALHSFVFPGAIGTKDKFHYSRPLLPTT-PLKSSALSICQLVQASKTDAEVLLKGVGD 294
           LR A  S      + T  K   +   +PT+ PL+ SAL  C   +A K D + LLKGVGD
Sbjct: 13  LRLAFRSVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIKGDVDFLLKGVGD 72

Query: 295 KDSVEDVKXXXXXXXXXXXXXXXXHTGFLTPPVLNESVKALKKMAEIKLVAQGGYPE 465
           +   ++VK                HT FLTPP++ ESV  L+K A++K+VAQGGYPE
Sbjct: 73  QAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVAQGGYPE 129


>ref|XP_002891729.1| hypothetical protein ARALYDRAFT_314636 [Arabidopsis lyrata subsp.
           lyrata] gi|297337571|gb|EFH67988.1| hypothetical protein
           ARALYDRAFT_314636 [Arabidopsis lyrata subsp. lyrata]
          Length = 759

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
 Frame = +1

Query: 118 LRTALHSFVFPGAIGTKDKFHYSRPLLPTT-PLKSSALSICQLVQASKTDAEVLLKGVGD 294
           LR    S      + +  K   S   +P + PL+ SAL  C + +A K D + LLKGVGD
Sbjct: 451 LRQTFRSVAASSYLHSNHKTLISNLSIPASFPLRHSALRRCYIAEAIKGDVDFLLKGVGD 510

Query: 295 KDSVEDVKXXXXXXXXXXXXXXXXHTGFLTPPVLNESVKALKKMAEIKLVAQGGYPE 465
           +   ++VK                HT FLTPP++ ESV  L K A++K+VAQGGYPE
Sbjct: 511 QAVAKEVKQILEMARRAASKREVLHTDFLTPPIVKESVLVLGKFADVKIVAQGGYPE 567