BLASTX nr result

ID: Cephaelis21_contig00033367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033367
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
gb|AFK47126.1| unknown [Medicago truncatula]                          142   4e-32
ref|XP_002889127.1| pentatricopeptide repeat-containing protein ...   142   4e-32

>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/92 (75%), Positives = 81/92 (88%)
 Frame = +1

Query: 1   REGLMDEARVIVEGMPMKPNVVVWGCLMGACEKYGNVEIGEWVAKHLLELEPWNDGVYVV 180
           R GL++EAR +VE MPMK NV+VWGCLMGACEKYGNV++GEWVA+HLLELEPWNDGV+VV
Sbjct: 381 RAGLLEEARKMVERMPMKANVIVWGCLMGACEKYGNVKMGEWVAEHLLELEPWNDGVFVV 440

Query: 181 LSNIYASNNLWEEVERIRKIMKGRELSKIPGY 276
           LSNIYAS  LW EVER+R +MK R+L K+P Y
Sbjct: 441 LSNIYASRGLWREVERVRGVMKERKLDKVPAY 472


>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 614

 Score =  146 bits (368), Expect = 2e-33
 Identities = 60/92 (65%), Positives = 79/92 (85%)
 Frame = +1

Query: 1   REGLMDEARVIVEGMPMKPNVVVWGCLMGACEKYGNVEIGEWVAKHLLELEPWNDGVYVV 180
           + GL++EAR ++E MPMK N ++WGCL+G CEK+GNVEIGEW  KHL ELEPWNDGVYVV
Sbjct: 516 KAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVV 575

Query: 181 LSNIYASNNLWEEVERIRKIMKGRELSKIPGY 276
           LSNIYA+N +W+E +++R +MK R+L+K+PGY
Sbjct: 576 LSNIYATNGMWKEAQKMRDVMKQRQLAKVPGY 607


>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 609

 Score =  146 bits (368), Expect = 2e-33
 Identities = 60/92 (65%), Positives = 79/92 (85%)
 Frame = +1

Query: 1   REGLMDEARVIVEGMPMKPNVVVWGCLMGACEKYGNVEIGEWVAKHLLELEPWNDGVYVV 180
           + GL++EAR ++E MPMK N ++WGCL+G CEK+GNVEIGEW  KHL ELEPWNDGVYVV
Sbjct: 511 KAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVV 570

Query: 181 LSNIYASNNLWEEVERIRKIMKGRELSKIPGY 276
           LSNIYA+N +W+E +++R +MK R+L+K+PGY
Sbjct: 571 LSNIYATNGMWKEAQKMRDVMKQRQLAKVPGY 602


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/92 (70%), Positives = 76/92 (82%)
 Frame = +1

Query: 1   REGLMDEARVIVEGMPMKPNVVVWGCLMGACEKYGNVEIGEWVAKHLLELEPWNDGVYVV 180
           R GL D+AR +VE MPMKPN VVWGCLMGACEK+GNV++ EWVA++L  LEPWN+GVYVV
Sbjct: 349 RAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVV 408

Query: 181 LSNIYASNNLWEEVERIRKIMKGRELSKIPGY 276
           LSNIYA+  LW+EVERIR  MK   L+KIP Y
Sbjct: 409 LSNIYANKGLWKEVERIRSFMKEGRLAKIPAY 440


>ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334968|gb|EFH65386.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 466

 Score =  142 bits (357), Expect = 4e-32
 Identities = 58/92 (63%), Positives = 80/92 (86%)
 Frame = +1

Query: 1   REGLMDEARVIVEGMPMKPNVVVWGCLMGACEKYGNVEIGEWVAKHLLELEPWNDGVYVV 180
           R+G + EA+ +VE MPMKPNV+VWGCLMG CEK+G+VE+ EWVA +++ELEPWNDGVYVV
Sbjct: 368 RDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVV 427

Query: 181 LSNIYASNNLWEEVERIRKIMKGRELSKIPGY 276
           L+N+YA   +W++VER+RK+MK ++++KIP Y
Sbjct: 428 LANVYALKGMWKDVERVRKVMKEKKVAKIPAY 459


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