BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033342
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]       96   2e-18
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...    96   4e-18
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    92   6e-17
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]       92   6e-17
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...    89   3e-16

>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/84 (57%), Positives = 60/84 (71%)
 Frame = -2

Query: 253 AYATVQFIDIRSAELIISLAQQRLYYGSSYLTAWEMPADIVPRPRNFVHQMMQQIVLSFG 74
           A+A VQF     A LII LA QRLYYG SYL A EM  DIVP+PR F+H  M+++ ++FG
Sbjct: 46  AFAIVQFTRSSDAGLIIRLANQRLYYGRSYLKAREMETDIVPKPRVFLH-TMERVTVNFG 104

Query: 73  CQTSKNKFSVLWKKENVSVKFGIG 2
           CQ S+ KF VLWK +NV++ FG G
Sbjct: 105 CQVSEEKFYVLWKADNVTLNFGTG 128


>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1133

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = -2

Query: 250 YATVQFIDIRSAELIISLAQQRLYYGSSYLTAWEMPADIVPRPRNFVHQMMQQIVLSFGC 71
           YA VQF   R+AE IISLA  RL+YG SYL A  M  DI+P+PR+F+H  M+ + L FG 
Sbjct: 48  YAIVQFTTTRAAEQIISLANPRLWYGHSYLNARPMDRDIIPQPRSFLH-TMESVTLHFGY 106

Query: 70  QTSKNKFSVLWKKENVSVKFGIG 2
           QTSK KFS +W   NVSV FG+G
Sbjct: 107 QTSKEKFSAVWSGNNVSVNFGLG 129


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/83 (59%), Positives = 59/83 (71%)
 Frame = -2

Query: 250 YATVQFIDIRSAELIISLAQQRLYYGSSYLTAWEMPADIVPRPRNFVHQMMQQIVLSFGC 71
           +A VQF  +R AELIISLA+Q L+YG +YL A EM  DI+P+PR F+H M  +I L FG 
Sbjct: 48  HAKVQFTSLRLAELIISLAKQ-LWYGGNYLKAREMDLDIIPKPRTFLHSM-DRITLHFGY 105

Query: 70  QTSKNKFSVLWKKENVSVKFGIG 2
           Q S  +F VLWK  NVSVKFG G
Sbjct: 106 QMSNERFCVLWKAINVSVKFGFG 128


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = -2

Query: 253 AYATVQFIDIRSAELIISLAQQRLYYGSSYLTAWEMPADIVPRPRNFVHQMMQQIVLSFG 74
           A+A VQF     A LII LA QRLYYG SYL A EM  DIVP+PR F+H  M+++ ++F 
Sbjct: 46  AFAIVQFTRSSDAGLIIRLANQRLYYGRSYLKAREMETDIVPKPRVFLH-TMERVTVNFD 104

Query: 73  CQTSKNKFSVLWKKENVSVKFGIG 2
           C  S+ KF VLWK +NV++ FG G
Sbjct: 105 CHVSEEKFYVLWKADNVTLNFGTG 128


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/83 (53%), Positives = 57/83 (68%)
 Frame = -2

Query: 250 YATVQFIDIRSAELIISLAQQRLYYGSSYLTAWEMPADIVPRPRNFVHQMMQQIVLSFGC 71
           +A VQF     AE II+L +++++YG +YL A EM  DI+P+PR F+H  M +I L FGC
Sbjct: 48  HAKVQFTSFELAEFIITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHS-MDRITLHFGC 106

Query: 70  QTSKNKFSVLWKKENVSVKFGIG 2
           Q S  +F VLWK  NVSVKFG G
Sbjct: 107 QMSDERFCVLWKAINVSVKFGSG 129