BLASTX nr result

ID: Cephaelis21_contig00033301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033301
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-11
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    55   6e-06

>ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score = 72.0 bits (175), Expect(2) = 2e-11
 Identities = 31/45 (68%), Positives = 39/45 (86%)
 Frame = -1

Query: 137 VASNAMIVVFSKNGCVQDAKELFDVMSEKNSCSWNSMITCYCKVG 3
           VA+NAMI   SK+G V++A+ LFD M+E+NSCSWNSMITCYCK+G
Sbjct: 77  VANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLG 121



 Score = 21.6 bits (44), Expect(2) = 2e-11
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 207 DFYAKVGD 184
           DFYAKVGD
Sbjct: 53  DFYAKVGD 60


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/64 (43%), Positives = 39/64 (60%)
 Frame = -1

Query: 194 RWVISFCKAGVRKNAG*RCVASNAMIVVFSKNGCVQDAKELFDVMSEKNSCSWNSMITCY 15
           RWV S+ +   R   G     SNAM+ +++K G V+DAK LFD M EK+  SW +M+  Y
Sbjct: 257 RWVHSYIE---RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGY 313

Query: 14  CKVG 3
            K+G
Sbjct: 314 AKIG 317


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