BLASTX nr result

ID: Cephaelis21_contig00033285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033285
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26359.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002284161.1| PREDICTED: protein transport protein sec23-l...    86   3e-15
ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
emb|CAN67335.1| hypothetical protein VITISV_024487 [Vitis vinifera]    80   1e-13
ref|NP_568626.1| sec23/sec24-like transport protein [Arabidopsis...    80   2e-13

>emb|CBI26359.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -2

Query: 229 RGVSAEKTKELLGIHHSKQHH-GGILTVRKQGFLLPVSECEFRVTSAIEELYSSTHTVPG 53
           R +S+++ +E LGI  +KQ   G   T  KQ FL+PVSECEF +T+AIEE++SS   +PG
Sbjct: 174 RELSSDQIQEFLGITRTKQQQLGKTPTAEKQTFLVPVSECEFSITTAIEEIHSSVQVLPG 233

Query: 52  ARPLRSTGVAISAAVGL 2
            RPLRSTG AISAA+GL
Sbjct: 234 HRPLRSTGAAISAAIGL 250


>ref|XP_002284161.1| PREDICTED: protein transport protein sec23-like isoform 1 [Vitis
           vinifera]
          Length = 793

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -2

Query: 229 RGVSAEKTKELLGIHHSKQHH-GGILTVRKQGFLLPVSECEFRVTSAIEELYSSTHTVPG 53
           R +S+++ +E LGI  +KQ   G   T  KQ FL+PVSECEF +T+AIEE++SS   +PG
Sbjct: 235 RELSSDQIQEFLGITRTKQQQLGKTPTAEKQTFLVPVSECEFSITTAIEEIHSSVQVLPG 294

Query: 52  ARPLRSTGVAISAAVGL 2
            RPLRSTG AISAA+GL
Sbjct: 295 HRPLRSTGAAISAAIGL 311


>ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|222864775|gb|EEF01906.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
 Frame = -2

Query: 229 RGVSAEKTKELLGIHHSK---QHHGGILTVRKQGFLLPVSECEFRVTSAIEELYSSTHTV 59
           R VS+E+T++ LGI+ +K   Q  G    ++KQGFLLPVSECEF +T+AIEE+ S    +
Sbjct: 193 REVSSEQTQQFLGIYSTKWQRQQLGKTPVIQKQGFLLPVSECEFNITTAIEEICSLAVVM 252

Query: 58  PGARPLRSTGVAISAAVGL 2
           PG RP R TG AIS A+GL
Sbjct: 253 PGHRPQRCTGAAISVALGL 271


>emb|CAN67335.1| hypothetical protein VITISV_024487 [Vitis vinifera]
          Length = 706

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/69 (59%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 KELLGIHHSKQHH-GGILTVRKQGFLLPVSECEFRVTSAIEELYSSTHTVPGARPLRSTG 29
           ++ LGI  +KQ   G   T  KQ FL+PVSECEF +T+AIEE++SS   +PG RPLRSTG
Sbjct: 159 QQFLGITRTKQQQLGKTPTAEKQTFLVPVSECEFSITTAIEEIHSSVQVLPGHRPLRSTG 218

Query: 28  VAISAAVGL 2
            AISAA+GL
Sbjct: 219 AAISAAIGL 227


>ref|NP_568626.1| sec23/sec24-like transport protein [Arabidopsis thaliana]
           gi|28058769|gb|AAO29951.1| Unknown protein [Arabidopsis
           thaliana] gi|34098821|gb|AAQ56793.1| At5g43670
           [Arabidopsis thaliana] gi|332007610|gb|AED94993.1|
           sec23/sec24-like transport protein [Arabidopsis
           thaliana]
          Length = 794

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
 Frame = -2

Query: 229 RGVSAEKTKELLGIHHSKQ-HHGGILTVRKQGFLLPVSECEFRVTSAIEELYSSTHTVPG 53
           R +S ++ ++ LG+ +SKQ HHG +  +RKQ FLLP+ ECEF +TSA EE+       PG
Sbjct: 234 RDLSPDQIQQFLGLGYSKQFHHGKMSAIRKQSFLLPLVECEFNLTSAFEEIIPLVDVKPG 293

Query: 52  ARPLRSTGVAISAAVGL 2
            RP RSTG AIS A+GL
Sbjct: 294 HRPHRSTGAAISTALGL 310


Top