BLASTX nr result

ID: Cephaelis21_contig00033280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033280
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot...   170   2e-40
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   170   2e-40
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   170   2e-40
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              164   2e-38
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   158   6e-37

>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
           sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
           repair and recombination protein RAD54-like [Cucumis
           sativus]
          Length = 928

 Score =  170 bits (430), Expect = 2e-40
 Identities = 97/190 (51%), Positives = 118/190 (62%), Gaps = 8/190 (4%)
 Frame = +1

Query: 70  EDDETVSVSERSSDSGDEFISDPEGXXXXXXXXXXXXXXXXTVITHHHQTSKAFSAPPDE 249
           ED++ +  +  SSDS D++I D  G                       + S + S   DE
Sbjct: 2   EDEDEIVPASDSSDSSDDYI-DINGEAFQDEDD-------------EEEQSSSLSPSSDE 47

Query: 250 DRKSRNVAALVRGNLVVKRQSLLPRVYSVTDAAARLRKPFKPPCSDGYGDTNEQLARRLW 429
           D KS+NV AL+RGNLVV+RQSLLPRV SV + AA  RKPFKPPCS GY + N QLARRLW
Sbjct: 48  DLKSKNVDALLRGNLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCSSGYDERNNQLARRLW 107

Query: 430 ARKRFVPWGSMRPALVAITNNLNVSEAVEND-----VDLPPGIEPLVLWHSQDLD---CN 585
           ARKRFVPWGS++PA   I  NL + +A END     V LPPGI+PLVLW  +D +    N
Sbjct: 108 ARKRFVPWGSLKPASSVIATNLFLPKAAENDAVEESVTLPPGIDPLVLWQPEDSELNVTN 167

Query: 586 SAFISVDPLL 615
            A I+VDPLL
Sbjct: 168 LASITVDPLL 177


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 934

 Score =  170 bits (430), Expect = 2e-40
 Identities = 101/190 (53%), Positives = 114/190 (60%), Gaps = 8/190 (4%)
 Frame = +1

Query: 70  EDDETVSVSERSSDSGDEFISDPEGXXXXXXXXXXXXXXXXTVITHHHQTSKAFSAPPDE 249
           E DE V  S   SDS DEF  + E                        + S   S   DE
Sbjct: 3   EYDEEVPSSSDPSDSSDEFAGESEEEEEEE--------------NDDEERSAVKSPTSDE 48

Query: 250 DRKSRNVAALVRGNLVVKRQSLLPRVYSVTDAAARLRKPFKPPCSDGYGDTNEQLARRLW 429
            RKS+NV AL+RGNLV++RQSLLPRV SVTD AA  RKPFKPP S+GY D N+QL  RLW
Sbjct: 49  GRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHDRNDQLVHRLW 108

Query: 430 ARKRFVPWGSMRPALVAITNNLNVSEAVEND-----VDLPPGIEPLVLWH---SQDLDCN 585
           ARKRFVPWGS RPALV ITN +N+S A E D     V LP GI+PLVLWH   S++   N
Sbjct: 109 ARKRFVPWGSSRPALVLITNRVNISSAAEKDVLEESVSLPAGIDPLVLWHPEESEEQADN 168

Query: 586 SAFISVDPLL 615
              I VDPLL
Sbjct: 169 LMPIVVDPLL 178


>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  170 bits (430), Expect = 2e-40
 Identities = 102/190 (53%), Positives = 114/190 (60%), Gaps = 8/190 (4%)
 Frame = +1

Query: 70  EDDETVSVSERSSDSGDEFISDPEGXXXXXXXXXXXXXXXXTVITHHHQTSKAFSAPPDE 249
           E DE V  S   SDS DEF  + E                        + S   S   DE
Sbjct: 3   EYDEDVPSSSDPSDSSDEFAGESEEEEEEE--------------NDDEERSAVKSPTSDE 48

Query: 250 DRKSRNVAALVRGNLVVKRQSLLPRVYSVTDAAARLRKPFKPPCSDGYGDTNEQLARRLW 429
            RKS+NV AL+RGNLVV+RQSLLPRV SVTD AA  RKPFKPP S+GY D N+QL  RLW
Sbjct: 49  GRKSQNVDALLRGNLVVRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHDRNDQLVHRLW 108

Query: 430 ARKRFVPWGSMRPALVAITNNLNVSEAVEND-----VDLPPGIEPLVLWH---SQDLDCN 585
           ARKRFVPWGS RPALV ITN +N+S A E D     V LP GI+PLVLWH   S++   N
Sbjct: 109 ARKRFVPWGSSRPALVLITNCVNISSAAEKDVLEESVSLPAGIDPLVLWHPEESEEQADN 168

Query: 586 SAFISVDPLL 615
              I VDPLL
Sbjct: 169 LMPIVVDPLL 178


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  164 bits (414), Expect = 2e-38
 Identities = 89/142 (62%), Positives = 101/142 (71%), Gaps = 8/142 (5%)
 Frame = +1

Query: 214 QTSKAFSAPPDEDRKSRNVAALVRGNLVVKRQSLLPRVYSVTDAAARLRKPFKPPCSDGY 393
           + S   S   DE RKS+NV AL+RGNLV++RQSLLPRV SVTD AA  RKPFKPP S+GY
Sbjct: 31  ERSAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGY 90

Query: 394 GDTNEQLARRLWARKRFVPWGSMRPALVAITNNLNVSEAVEND-----VDLPPGIEPLVL 558
            D N+QL  RLWARKRFVPWGS RPALV ITN +N+S A E D     V LP GI+PLVL
Sbjct: 91  HDRNDQLVHRLWARKRFVPWGSSRPALVLITNRVNISSAAEKDVLEESVSLPAGIDPLVL 150

Query: 559 WH---SQDLDCNSAFISVDPLL 615
           WH   S++   N   I VDPLL
Sbjct: 151 WHPEESEEQADNLMPIVVDPLL 172


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
           communis] gi|223542157|gb|EEF43701.1| DNA repair and
           recombination protein RAD54B, putative [Ricinus
           communis]
          Length = 940

 Score =  158 bits (400), Expect = 6e-37
 Identities = 87/140 (62%), Positives = 100/140 (71%), Gaps = 9/140 (6%)
 Frame = +1

Query: 223 KAFSAPPDEDRKSRNVAALVRGNLVVKRQSLLPRVYSVTDAAARLRKPFKPPCSDGYGDT 402
           +A  +P DE+ KS+NV ALVRGNLVVKRQSLLPRV SVT+ AA  RKPFKPP S+GY D 
Sbjct: 47  QAAQSPSDEELKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAICRKPFKPPSSNGYKDG 106

Query: 403 NEQLARRLWARKRFVPWGSMRPALVAITNNLNVSE------AVENDVDLPPGIEPLVLWH 564
           N+QL+RRL ARKRFVPWGS RP L+ ITN +NVS        VE+ V LPPGI+PLVLW 
Sbjct: 107 NQQLSRRLLARKRFVPWGSSRPVLLPITNRINVSSPFEKDVVVEDTVTLPPGIDPLVLWQ 166

Query: 565 SQDLDC---NSAFISVDPLL 615
             + D    N   I VD LL
Sbjct: 167 PDECDSTAGNFIPIIVDSLL 186