BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033246
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    70   1e-14
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   2e-14
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    70   3e-14
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    77   5e-14
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               77   5e-14

>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 70.5 bits (171), Expect(2) = 1e-14
 Identities = 37/121 (30%), Positives = 61/121 (50%)
 Frame = +1

Query: 1    IWRLISQCNFSILINGEPNGFFPSLGGLCQSDPLSSALFIIAAEVLSRSLNELITSPKFK 180
            I   +   ++S+LING P+G+     G+ Q DPLS  LFI+  ++LS  +N   +S   +
Sbjct: 988  IMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLR 1047

Query: 181  LYHVLKNFDPISHLAYADAMIVFSQGDRRSLKEVMQTLSKYEQVSGQ*LSKPKSYFMVGG 360
               +      I+HL +AD  + F Q + R+ + +      YE  SGQ ++  KS    G 
Sbjct: 1048 GVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGS 1107

Query: 361  K 363
            +
Sbjct: 1108 R 1108



 Score = 33.5 bits (75), Expect(2) = 1e-14
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 378  RSRVTQVTGFSHQDMHIKYLGCPLYVGRKSKTLFGHLVDNI 500
            +SR+ Q+    +Q    KYLG P   GRK K +F +++D +
Sbjct: 1114 QSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRV 1154


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 75.9 bits (185), Expect(2) = 2e-14
 Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +1

Query: 1   IWRLISQCNFSILINGEPN-GFFPSLGGLCQSDPLSSALFIIAAEVLSRSLNELITSPKF 177
           +   ++   FS+L+NG+P+  FFPS  GL Q DPLS  LF++ AE LS  L +   + + 
Sbjct: 615 VMNCVTSARFSVLVNGQPSRNFFPS-RGLRQGDPLSPFLFVVCAEGLSTLLRD---AEEK 670

Query: 178 KLYHVLK---NFDPISHLAYADAMIVFSQGDRRSLKEVMQTLSKYEQVSGQ*LSKPKS 342
           K+ H +K      PISHL +AD  ++F +     ++ VM  LS YE  SGQ L+  KS
Sbjct: 671 KVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKS 728



 Score = 27.7 bits (60), Expect(2) = 2e-14
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 405 FSHQDMHIKYLGCPLYVGRKSKTLFGHLVDNI 500
           F   + H KYLG P ++G   K +F  + D +
Sbjct: 750 FKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRV 781


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 70.5 bits (171), Expect(2) = 3e-14
 Identities = 37/121 (30%), Positives = 61/121 (50%)
 Frame = +1

Query: 1    IWRLISQCNFSILINGEPNGFFPSLGGLCQSDPLSSALFIIAAEVLSRSLNELITSPKFK 180
            I   +   ++S+LING P+G+     G+ Q DPLS  LFI+  ++LS  +N   +S   +
Sbjct: 762  IMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLR 821

Query: 181  LYHVLKNFDPISHLAYADAMIVFSQGDRRSLKEVMQTLSKYEQVSGQ*LSKPKSYFMVGG 360
               +      I+HL +AD  + F Q + R+ + +      YE  SGQ ++  KS    G 
Sbjct: 822  GVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGS 881

Query: 361  K 363
            +
Sbjct: 882  R 882



 Score = 32.3 bits (72), Expect(2) = 3e-14
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 378  RSRVTQVTGFSHQDMHIKYLGCPLYVGRKSKTLFGHLVDNI 500
            +S++ Q+    +Q    KYLG P   GRK K +F +++D +
Sbjct: 888  QSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRV 928


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 76.6 bits (187), Expect(2) = 5e-14
 Identities = 38/113 (33%), Positives = 65/113 (57%)
 Frame = +1

Query: 10  LISQCNFSILINGEPNGFFPSLGGLCQSDPLSSALFIIAAEVLSRSLNELITSPKFKLYH 189
           ++     S+L+NG+  GFF    G+ Q DPLS  LF +  EVLSR+L+   T  +     
Sbjct: 621 ILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMS 680

Query: 190 VLKNFDPISHLAYADAMIVFSQGDRRSLKEVMQTLSKYEQVSGQ*LSKPKSYF 348
             +     +H+ YAD +++F  G +R+++ +++  S+Y +VSGQ ++  KS F
Sbjct: 681 YCRGVSFPTHILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSRF 733



 Score = 25.4 bits (54), Expect(2) = 5e-14
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 387 VTQVTGFSHQDMHIKYLGCPLYVGR 461
           ++ + GF+   +   YLGCP++ G+
Sbjct: 746 ISSLLGFNVGSLPFTYLGCPIFRGK 770


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 76.6 bits (187), Expect(2) = 5e-14
 Identities = 45/122 (36%), Positives = 70/122 (57%)
 Frame = +1

Query: 1    IWRLISQCNFSILINGEPNGFFPSLGGLCQSDPLSSALFIIAAEVLSRSLNELITSPKFK 180
            IW  IS  ++SI  NGE  GFF    G+ Q DP+SS LF++  +VLS+SL+    +  F 
Sbjct: 666  IWVCISSASYSIAFNGELIGFFQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFN 725

Query: 181  LYHVLKNFDPISHLAYADAMIVFSQGDRRSLKEVMQTLSKYEQVSGQ*LSKPKSYFMVGG 360
            L H       I+HL++AD ++VFS G   S+  ++  L  + Q SG  +++ K+  ++ G
Sbjct: 726  L-HPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDG 784

Query: 361  KN 366
             N
Sbjct: 785  GN 786



 Score = 25.4 bits (54), Expect(2) = 5e-14
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 402 GFSHQDMHIKYLGCPLYVGRKSKTLFGHLVDNI 500
           G +H  + ++YLG PL   +  +  +  LVD I
Sbjct: 798 GITHGSLPVRYLGVPLMSQKMRRQDYQPLVDRI 830