BLASTX nr result

ID: Cephaelis21_contig00033158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033158
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold ...    60   5e-07
gb|ABI34321.1| RNase H family protein [Solanum demissum]               56   8e-06

>gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 111

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 33/107 (30%), Positives = 53/107 (49%)
 Frame = -1

Query: 498 LQGLEYCKAQGFSQVDVQSDFQTLVNLIKTNAVSPWKHITHLTLIFQLFHETGYLLSHAY 319
           +  +E   + GF  + +QSD Q ++   K+ ++ PW          +L H   +  +H Y
Sbjct: 1   MNAIELASSMGFFNIWLQSDSQLVILAFKSISIVPWALRNRWENCLKLTHRMRFCATHIY 60

Query: 318 REVSTVADWLAKFASSQKQSQTFPPDTLPHWLRGYLRLDQLQMPNIR 178
           RE +T AD LA F  +      F  DT+P ++RG    ++L MPN R
Sbjct: 61  REGNTCADSLANFGLTLSSLDLFWFDTVPDFVRGECIKNRLGMPNFR 107


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
 Frame = -1

Query: 528  TNFSTEIQALLQGLEYCKAQGFSQVDVQSDFQTLVNLIKTNAVSPWKHITHLTLIFQLFH 349
            +N   E  A   G+ +C  QGF    ++ D + +V++++    +  K    +  I Q+  
Sbjct: 793  SNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVA 852

Query: 348  ETGYLLSHAYREVSTVADWLAKFASSQKQSQTFPP-DTLPHWLRGYLRLDQLQMPNIRVR 172
            +    ++H YRE + VAD LAK A    ++  +     +P    G  +LD++QMP+IR+R
Sbjct: 853  KMNCEVNHCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIRIR 912

Query: 171  IK*NNFSHKYL 139
               +NF   Y+
Sbjct: 913  YDKSNFFKYYV 923