BLASTX nr result

ID: Cephaelis21_contig00033098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033098
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    64   1e-08
ref|XP_002531802.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -2

Query: 174 MGQKIKRFYFVSRDPPQVGFESRVMGDFPTRFGE 73
           MGQ+IKRF FVSRD PQVGFESRVMGD+P RFGE
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE 34


>ref|XP_002531802.1| conserved hypothetical protein [Ricinus communis]
           gi|223528568|gb|EEF30590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +1

Query: 7   WEEPLPSCLIRGASIHQRRLKVLSEPCGKVTHHTALKPNLW-WIPGDKVKALDLLPHTLR 183
           ++  L S L RG SI Q RLKVL EPC  +T++T           GD VKALD LPHTL+
Sbjct: 6   YKNSLLSYLTRGPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLK 65

Query: 184 CSSPPIK 204
            SS PIK
Sbjct: 66  GSSTPIK 72


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