BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00033091
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   137   7e-31
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   134   1e-29
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein...   123   2e-26
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26

>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  137 bits (346), Expect = 7e-31
 Identities = 82/157 (52%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
 Frame = -2

Query: 463 EAIFSIFSCCPSTSAKYPLHPRSLGPLKLPVSTSTMPFSLQCLLYPHSSV---PVRKPSF 293
           EA  SIFS   S+S+K     R    + L  S       L+  LYP   +   P  K SF
Sbjct: 5   EASLSIFSLYRSSSSKLLFSHRPPPSMSLHSSAFIPSICLKYPLYPLPLLYTNPTTKFSF 64

Query: 292 KIFSXXXXXXXXXEKTTEPTQQIDQRRKLFVLNLPWSFTVADIKNVFGECGSVTDVEIIK 113
           ++ S         +   E TQ+ +Q+RKLFVLNLPWS +V DIKN+FGECG+VTDVEIIK
Sbjct: 65  ELCSSVQEIEVEAKP--EQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIK 122

Query: 112 QKDGKNRGFAFVTMASWEEARAAIEKFDSFELSGRII 2
           QKDG++RG+AFVTM S EEA+A +EKFDS+ELSGRII
Sbjct: 123 QKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRII 159


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  134 bits (336), Expect = 1e-29
 Identities = 75/154 (48%), Positives = 100/154 (64%)
 Frame = -2

Query: 463 EAIFSIFSCCPSTSAKYPLHPRSLGPLKLPVSTSTMPFSLQCLLYPHSSVPVRKPSFKIF 284
           EA  S+F   PS+S+K  L P  +   K    ++++P         +  +  RK SF+ F
Sbjct: 5   EAAVSLFLPHPSSSSKSLLSPTFINLFKHKCRSNSIPLLSHNFSLSNIHLTARKLSFERF 64

Query: 283 SXXXXXXXXXEKTTEPTQQIDQRRKLFVLNLPWSFTVADIKNVFGECGSVTDVEIIKQKD 104
           S             E TQ+  Q+RKL+V NLPWS +V DIKN+FG+CG+VTDVEIIKQK+
Sbjct: 65  STAQEIMIP-----EETQETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKQKN 119

Query: 103 GKNRGFAFVTMASWEEARAAIEKFDSFELSGRII 2
           G++RGFAFVT+AS EEA+AAI+K DS E+SGRII
Sbjct: 120 GRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRII 153


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  132 bits (333), Expect = 2e-29
 Identities = 78/144 (54%), Positives = 95/144 (65%)
 Frame = -2

Query: 433 PSTSAKYPLHPRSLGPLKLPVSTSTMPFSLQCLLYPHSSVPVRKPSFKIFSXXXXXXXXX 254
           PS   KYPL+P       LP            LLY +   P  K SF++ S         
Sbjct: 10  PSICLKYPLYP-------LP------------LLYTN---PTTKFSFELCSSVQEIEVEA 47

Query: 253 EKTTEPTQQIDQRRKLFVLNLPWSFTVADIKNVFGECGSVTDVEIIKQKDGKNRGFAFVT 74
           +   E TQ+ +Q+RKLFVLNLPWS +V DIKN+FGECG+VTDVEIIKQKDG++RG+AFVT
Sbjct: 48  KP--EQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVT 105

Query: 73  MASWEEARAAIEKFDSFELSGRII 2
           M S EEA+A +EKFDS+ELSGRII
Sbjct: 106 MDSGEEAQAVVEKFDSYELSGRII 129


>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
           thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
           RNA binding protein precursor [Arabidopsis thaliana]
           gi|14596023|gb|AAK68739.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|23198314|gb|AAN15684.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
           motifs) family protein [Arabidopsis thaliana]
          Length = 308

 Score =  123 bits (308), Expect = 2e-26
 Identities = 78/161 (48%), Positives = 101/161 (62%), Gaps = 7/161 (4%)
 Frame = -2

Query: 463 EAIFSIFSCCPSTSAKYP-LHPRSLGPLKLPVSTSTMPFSLQCLLYPHS-SVPVRKPSFK 290
           EA  SIFS   S+S+  P L  +    LKL   +  +P +L  +    S S   R+    
Sbjct: 5   EASLSIFSFSSSSSSSKPYLFSKRSSSLKLTALSLRIPSNLSPVFSLRSGSDNSRRLVSV 64

Query: 289 IFSXXXXXXXXXEKT-----TEPTQQIDQRRKLFVLNLPWSFTVADIKNVFGECGSVTDV 125
           + S         E+T     TE TQ  + +RKLFV NLPWS +V DI  +FG+CG+V +V
Sbjct: 65  LCSVAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNV 124

Query: 124 EIIKQKDGKNRGFAFVTMASWEEARAAIEKFDSFELSGRII 2
           EII+QKDGKNRGFAFVTMAS EEA+AAI+KFD+F++SGRII
Sbjct: 125 EIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRII 165


>ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|222833851|gb|EEE72328.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  122 bits (305), Expect = 4e-26
 Identities = 72/158 (45%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
 Frame = -2

Query: 460 AIFSIFSCCPSTSAKYPLHPRSLGPLKLPVSTSTMPFSLQCLLYPHSSVPVRKPS----- 296
           A  S FS    + +++ L P+S  PL L +  S  P  L    +P  S+    P      
Sbjct: 9   ATLSFFSTHHPSYSRFFLSPKS-PPLSLNLHISN-PTPLISHNFPQPSLTQNHPRSKSLC 66

Query: 295 FKIFSXXXXXXXXXEKTTEPTQQIDQRRKLFVLNLPWSFTVADIKNVFGECGSVTDVEII 116
           F++ S             E  Q+ + +RKLFV+NLPWSF+V DIK++FG+CG+V+DVEII
Sbjct: 67  FQLCSTVQEVTVEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEII 126

Query: 115 KQKDGKNRGFAFVTMASWEEARAAIEKFDSFELSGRII 2
           KQK+G++RGFAFVTM + EEA+AAI+KF+S E+SGRII
Sbjct: 127 KQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRII 164