BLASTX nr result

ID: Cephaelis21_contig00032964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032964
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447811.1| hypothetical protein SORBIDRAFT_06g016240 [S...    75   1e-11
ref|XP_002441018.1| hypothetical protein SORBIDRAFT_09g018950 [S...    74   3e-11
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    68   2e-09
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    68   2e-09
gb|ABA97040.1| retrotransposon protein, putative, unclassified [...    67   4e-09

>ref|XP_002447811.1| hypothetical protein SORBIDRAFT_06g016240 [Sorghum bicolor]
           gi|241938994|gb|EES12139.1| hypothetical protein
           SORBIDRAFT_06g016240 [Sorghum bicolor]
          Length = 342

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 62/214 (28%), Positives = 91/214 (42%), Gaps = 3/214 (1%)
 Frame = -1

Query: 760 VPMCISFFIWRLFNRLLPFPEVLNSFGFSLASKCYCCPSADFFYHCFLCCPLARDVWSFF 581
           VP  I  F+WRL  + LP  +VL+       S C  C + D + H  + C +A+ VW+  
Sbjct: 29  VPSKIKVFLWRLARQSLPSGDVLHHRNLKAQSTCAICGALDSWKHSLIDCHMAKCVWALE 88

Query: 580 ATHL--HIRLPVVGDLYELLHELFFSTLLGVDLHKF*VLLPLVCCWGIWHVRNVTLYGNG 407
              +  H+      D    LH +  +TL   DL +      LV  W IW+ +   +Y N 
Sbjct: 89  REDITEHLCTIPAQDARGWLHTI-ITTLKHEDLTRV-----LVTLWAIWYAKRQAVYENS 142

Query: 406 HPSSSQAIFFALYQLSTITSVQPLCLLQAS-QHWLCYFIGLRMAPKTL*KFAVVWVKPPM 230
             S      F    +S +  V+      AS QH        + AP         W+ PP 
Sbjct: 143 FQSPLSTHCFVKSFMSDLELVKQAAPPGASHQHQ-----NAQKAP---------WIPPPA 188

Query: 229 GWYKLNVDGSTLENPSVASAGTILREALGEIVFA 128
           G  K+NVD +  +N S ASA  + R++ G  V A
Sbjct: 189 GVMKINVDAAISKNSSKASASAVARDSSGMFVGA 222


>ref|XP_002441018.1| hypothetical protein SORBIDRAFT_09g018950 [Sorghum bicolor]
           gi|241946303|gb|EES19448.1| hypothetical protein
           SORBIDRAFT_09g018950 [Sorghum bicolor]
          Length = 379

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 67/253 (26%), Positives = 107/253 (42%), Gaps = 2/253 (0%)
 Frame = -1

Query: 763 AVPMCISFFIWRLFNRLLPFPEVLNSFGFSLASKCYCCPSA-DFFYHCFLCCPLARDVWS 587
           AVP  +  F W+L   +LP  +        + S+C  C  A +  YH  + CP AR++  
Sbjct: 54  AVPPKVRIFAWKLARDILPTQKNKFIRKLEMDSQCPLCNCAVEDSYHATVECPQARNLRC 113

Query: 586 FFATHLHIRLPVVGD-LYELLHELFFSTLLGVDLHKF*VLLPLVCCWGIWHVRNVTLYGN 410
               H     P+  + L+      + S +L     +   L+ L+  W  W + N   + +
Sbjct: 114 AMREHW----PIPDEKLFRKTGPDWLSLMLDKCTQEQGDLIILIL-WRAWSLHNNATHNS 168

Query: 409 GHPSSSQAIFFALYQLSTITSVQPLCLLQASQHWLCYFIGLRMAPKTL*KFAVVWVKPPM 230
           G  S S+++FF L    T+  V     L       C+    R++     K +  W  PP 
Sbjct: 169 GSTSISESVFFLLNYRDTLLQVSQHESLDEKGKAKCWVAKPRLSSMLAIKQS--WEVPPA 226

Query: 229 GWYKLNVDGSTLENPSVASAGTILREALGEIVFADGFHLGHATNAHAKLQGLLLGLQTCR 50
           GW K+NVD S +     AS G ++R   GE++      L    +A A + GL L  + C 
Sbjct: 227 GWIKVNVDASFVNATGEASVGVVIRNHKGEVLLTAWRVLLRCASAEACVDGLRLASKWC- 285

Query: 49  QLGCHYVLVESDS 11
                  ++ESDS
Sbjct: 286 ---AGPTILESDS 295


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 12/257 (4%)
 Frame = -1

Query: 745 SFFIWRLFNRLLPFPEVLNSFGFSLASKC--YCCPSADFFYHCFLCCPLARDVWSFF--A 578
           +F  WR  +  LP  + L   G  + S C  +C   A+   H FL CP+   +W +   A
Sbjct: 85  AFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKA 144

Query: 577 THLHIRLPVVGDLYELLHELFFSTLLGVDLHKF*VLLPLVCCWGIWHVRNVTLYGNGHPS 398
           T  H+    + ++  ++  +  S ++ +              W IW   N   Y +G   
Sbjct: 145 TDQHLDFSSILNISRMVQHVMNSAIVHI-------------MWSIWLECN-NKYFDGVQK 190

Query: 397 SSQAIFFAL--------YQLSTITSVQPLCLLQASQHWLCYFIGLRMAPKTL*KFAVVWV 242
               +F  +        + L  +     +   + ++ +   F   R+ P       ++WV
Sbjct: 191 PMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSIPFKTNRVNPCR----EIIWV 246

Query: 241 KPPMGWYKLNVDGSTLENPSVASAGTILREALGEIVFADGFHLGHATNAHAKLQGLLLGL 62
            P  G  K+N DGS + +PS  S G I R +      A   ++G+AT   A+    +  +
Sbjct: 247 PPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAI 306

Query: 61  QTCRQLGCHYVLVESDS 11
           +  ++L    + +E+DS
Sbjct: 307 EKAKELHLTNIWIETDS 323


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
 Frame = -1

Query: 760 VPMCISFFIWRLFNRLLPFPEVLNSFGFSLASKC-YCCPSADFFYHCFLCCPLARDVWSF 584
           +P   SF  WRL +  LP  E L   G  + S C +C  SA+   H F  C +   +W +
Sbjct: 45  IPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDW 104

Query: 583 FATHLHIRLPVVGDLYELLHELFFSTLLGVDLHKF*VLLPLVCCWGIWHVRNVTLYGNGH 404
                   L     L  L+      + L  ++    ++  +   W IW  RN   + N H
Sbjct: 105 LGKGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTI---WSIWIERNQRCFHNKH 161

Query: 403 PSSSQAIFFALYQLSTITSVQPLCLLQASQHWLCYFIGLRM-----APKTL*KFAVVWVK 239
            + +      L ++    S   LC+++ +     Y +           +      ++W K
Sbjct: 162 QAMTTLFNIILAEVKMSFS---LCMIKGNSAMQDYKVAKLFNIPFKVKRVTPHLDIIW-K 217

Query: 238 PPMG-WYKLNVDGSTLENPSVASAGTILREALGEIVFADGFHLGHATNAHAKLQGLLLGL 62
           PP+G   K+N DGS++      S G ++R++    + A   ++G+AT   A+    ++ +
Sbjct: 218 PPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAM 277

Query: 61  QTCRQLGCHYVLVESDS 11
           +  +++   +V +E+DS
Sbjct: 278 EKAQEMQLMHVCLETDS 294


>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1913

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 5/254 (1%)
 Frame = -1

Query: 760  VPMCISFFIWRLFNRLLPFPEVLNSFGFSLASKCYCCPS-ADFFYHCFLCCPLARDVWSF 584
            VP  +  F WR  N  L   E         +  C  C +  +   H    CP A  +W  
Sbjct: 1624 VPQKVKVFCWRAANNCLANQENKKKRNLERSEICCICGNETEDVSHALSRCPHAVHLWEA 1683

Query: 583  FATHLHIRLPVVGDLYELLHELFFSTLLGVDLHKF*VLLPLVCCWGIWHVRNVTLYGNGH 404
                  + L V G+        FF  +      +  +L  ++  W IW VRN   +G   
Sbjct: 1684 MKAAGSLSLNVAGNATG--GSWFFDQIENTPAEERMMLCMML--WRIWFVRNELYHGKVP 1739

Query: 403  PSSSQAIFFALYQLSTITSVQ--PLCLLQASQHWLCYFIGLRMAPKTL*KFAVV-WVKPP 233
            P  + +  F     S++  ++  P   +   +H +     +R     L +     W KP 
Sbjct: 1740 PPIAVSKRFLESYCSSLLEIKQHPHADVVRGKHVVQQPTRMRSEANHLRRVVPARWEKPQ 1799

Query: 232  MGWYKLNVDGSTLENPSVASAGTILREALGEIVF-ADGFHLGHATNAHAKLQGLLLGLQT 56
            MGW KLNVDGS   N S    G +LR+++G ++F A GF    ++   ++L     G+  
Sbjct: 1800 MGWMKLNVDGSYDSNSSKGGIGVVLRDSVGTVIFSACGFLERCSSPLESELLACKEGINL 1859

Query: 55   CRQLGCHYVLVESD 14
              Q     +++ESD
Sbjct: 1860 ALQWTLLPIILESD 1873