BLASTX nr result
ID: Cephaelis21_contig00032952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00032952
(1341 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 640 0.0
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554... 634 e-179
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 632 e-179
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2... 632 e-179
ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi... 631 e-178
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 640 bits (1652), Expect = 0.0
Identities = 318/419 (75%), Positives = 362/419 (86%)
Frame = +3
Query: 84 DIKFSVMVSLFNWMQXXXXXXXXXXXXXXXLDAFCRKPGDYFSAIRLILPGLDRERGSYG 263
+ KFSV+ SLF W+Q LD FC G FSAIRLILP LDRERGSYG
Sbjct: 4 ETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCIN-GHQFSAIRLILPNLDRERGSYG 62
Query: 264 LKEHVLATCLIDALGMSRDSPDAQRLLNWRKGGPKTGASAGNFSLVASEVLQRRQGLTSG 443
LKE VLATCLIDALGMSR+S DA RL+NWRKGG KTGA+AGNF++VA+EVLQRRQG+TSG
Sbjct: 63 LKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSG 122
Query: 444 GLTLKQLNALLDRLASSDNRAEKTSVLSDLIRVTNAHEMKWIIMIILKDLKLGVSEKSIF 623
GLT+K+LN LLD LASS+NR EKTSVLS LI+ TNA EMKWI+MIILKDLKLG+SEKSIF
Sbjct: 123 GLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIF 182
Query: 624 HEFHPDAEDLFNVTCNLKLVCEKLRDRNQRHKRQDIEVGKPVRPQLALRVSNVGASWKKL 803
HEFHPDAEDLFNVTC+LKLVCEKL+DR+QRHKRQDIEVGK VRPQLA+RV++ A+WKKL
Sbjct: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKL 242
Query: 804 HGKEVVVECKFDGDRIQLHKNNLEMHFFSRNFLHHPEYEHAMSDIIANNILVDRCILDGE 983
HGKEVVVECKFDGDRIQ+HKN E+HFFSRNFL HPEY++AMS+I+A N+LVDRCILDGE
Sbjct: 243 HGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGE 302
Query: 984 MLVWDTSENRFADFGSNQEIAKATSEGLDNDRQLCYVAFDILYAGDTSVIHQSLRERHDL 1163
MLVWD S NRFA+FGSNQEIAKA EGLD+DRQLCYVAFDILY GDTSVIHQ+L+ERH+L
Sbjct: 303 MLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQLCYVAFDILYVGDTSVIHQTLKERHEL 362
Query: 1164 LRKVVKPIKGRFEILVPDCGLSGNRHSGESRQSFVARSVDEVEKFFKETVENRDEGIIL 1340
L+KVVKP+KGRFEILVP GL+ +R SGE S +A VD+VE+FFK+TVENRDEGI+L
Sbjct: 363 LQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIVL 421
>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
[Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
ligase 4 [Arabidopsis thaliana]
Length = 1219
Score = 634 bits (1635), Expect = e-179
Identities = 312/420 (74%), Positives = 359/420 (85%), Gaps = 1/420 (0%)
Frame = +3
Query: 84 DIKFSVMVSLFNWMQXXXXXXXXXXXXXXXLDAFCRKPGDYFSAIRLILPGLDRERGSYG 263
+IKFSV+VSLFNW+Q LD +C KP DYF A+RLI+P LDRERGSYG
Sbjct: 4 EIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYC-KPSDYFVAVRLIIPSLDRERGSYG 62
Query: 264 LKEHVLATCLIDALGMSRDSPDAQRLLNWRKGGP-KTGASAGNFSLVASEVLQRRQGLTS 440
LKE VLATCLIDALG+SRD+PDA RLLNWRKGG K GA+AGNFSL+A+EVLQRRQG+ S
Sbjct: 63 LKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMAS 122
Query: 441 GGLTLKQLNALLDRLASSDNRAEKTSVLSDLIRVTNAHEMKWIIMIILKDLKLGVSEKSI 620
GGLT+K+LN LLDRLASS+NRAEKT VLS LI+ TNA EMKW+I IILKDLKLG+SEKSI
Sbjct: 123 GGLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEKSI 182
Query: 621 FHEFHPDAEDLFNVTCNLKLVCEKLRDRNQRHKRQDIEVGKPVRPQLALRVSNVGASWKK 800
F EFHPDAEDLFNVTC+LKLVCEKLRDR+QRHKRQDIEVGK VRPQLA+R+ +V A+WKK
Sbjct: 183 FQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRIGDVNAAWKK 242
Query: 801 LHGKEVVVECKFDGDRIQLHKNNLEMHFFSRNFLHHPEYEHAMSDIIANNILVDRCILDG 980
LHGK+VV ECKFDGDRIQ+HKN ++H+FSRNFL H EY HAMSD+I NILVD+CILDG
Sbjct: 243 LHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCILDG 302
Query: 981 EMLVWDTSENRFADFGSNQEIAKATSEGLDNDRQLCYVAFDILYAGDTSVIHQSLRERHD 1160
EMLVWDTS NRFA+FGSNQEIAKA EGLD+ +QLCYVAFD+LY GDTSVIHQSL+ERH+
Sbjct: 303 EMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKERHE 362
Query: 1161 LLRKVVKPIKGRFEILVPDCGLSGNRHSGESRQSFVARSVDEVEKFFKETVENRDEGIIL 1340
LL+KVVKP+KGR E+LVP+ GL+ +R SGE S V + +VE+FFKETVENRDEGI+L
Sbjct: 363 LLKKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDEGIVL 422
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 632 bits (1630), Expect = e-179
Identities = 317/420 (75%), Positives = 361/420 (85%), Gaps = 1/420 (0%)
Frame = +3
Query: 84 DIKFSVMVSLFNWMQXXXXXXXXXXXXXXXLDAFCRKPGDYFSAIRLILPGLDRERGSYG 263
+ KFSV+ SLF W+Q LD FC G FSAIRLILP LDRERGSYG
Sbjct: 4 ETKFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFCIN-GHQFSAIRLILPNLDRERGSYG 62
Query: 264 LKEHVLATCLIDALGMSRDSPDAQRLLNWRKGGPKTGASAGNFSLVASEVLQRRQGLTSG 443
LKE VLATCLIDALGMSR+S DA RL+NWRKGG KTGA+AGNF++VA+EVLQRRQG+TSG
Sbjct: 63 LKESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSG 122
Query: 444 GLTLKQLNALLDRLASSDNRAEKTSVLSDLIRVTNAHEMKWIIMIILKDLKLGVSEKSIF 623
GLT+K+LN LLD LASS+NR EKTSVLS LI+ TNA EMKWI+MIILKDLKLG+SEKSIF
Sbjct: 123 GLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILKDLKLGISEKSIF 182
Query: 624 HEFHPDAEDLFNVTCNLKLVCEKLRDRNQRHKRQDIEVGKPVRPQLALRVSNVGASWKKL 803
HEFHPDAEDLFNVTC+LKLVCEKL+DR+QRHKRQDIEVGK VRPQLA+RV++ A+WKKL
Sbjct: 183 HEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVADATAAWKKL 242
Query: 804 HGKEVVVECKFDGDRIQLHKNNLEMHFFSRNFLHHPEYEHAMSDIIANNILVDRCILDGE 983
HGKEVVVECKFDGDRIQ+HKN E+HFFSRNFL HPEY++AMS+I+A N+LVDRCILDGE
Sbjct: 243 HGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQNLLVDRCILDGE 302
Query: 984 MLVWDTSENRFADFGSNQEIAKATSEGLDNDRQ-LCYVAFDILYAGDTSVIHQSLRERHD 1160
MLVWD S NRFA+FGSNQEIAKA EGLD+DRQ L YVAFDILY GDTSVIHQ+L+ERH+
Sbjct: 303 MLVWDISLNRFAEFGSNQEIAKAAKEGLDSDRQVLSYVAFDILYVGDTSVIHQTLKERHE 362
Query: 1161 LLRKVVKPIKGRFEILVPDCGLSGNRHSGESRQSFVARSVDEVEKFFKETVENRDEGIIL 1340
LL+KVVKP+KGRFEILVP GL+ +R SGE S +A VD+VE+FFK+TVENRDEGI+L
Sbjct: 363 LLQKVVKPLKGRFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIVL 422
>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
predicted protein [Populus trichocarpa]
Length = 1242
Score = 632 bits (1629), Expect = e-179
Identities = 311/426 (73%), Positives = 359/426 (84%), Gaps = 1/426 (0%)
Frame = +3
Query: 66 ASAEESDIKFSVMVSLFNWMQXXXXXXXXXXXXXXXLDAFCRKPGDYFSAIRLILPGLDR 245
+S+ + KFS++VSLFNW+ +D FC P DYFSA+RLILP LDR
Sbjct: 6 SSSSTAHTKFSILVSLFNWISKTKTSSRKRSKFRKFIDTFC-SPSDYFSAVRLILPNLDR 64
Query: 246 ERGSYGLKEHVLATCLIDALGMSRDSPDAQRLLNWRKGGPK-TGASAGNFSLVASEVLQR 422
ERG+YGLKE VLA LI+ALGMSRDSPDA +L+NWRKGG TGA+AGNFSLVA+EVLQR
Sbjct: 65 ERGTYGLKESVLAVSLIEALGMSRDSPDALKLINWRKGGANATGANAGNFSLVAAEVLQR 124
Query: 423 RQGLTSGGLTLKQLNALLDRLASSDNRAEKTSVLSDLIRVTNAHEMKWIIMIILKDLKLG 602
RQG SGGLT+++LN LLD+LASS+NR EKT+VL+ LI TN EMKWIIMIILKDLKLG
Sbjct: 125 RQGTVSGGLTIEELNGLLDKLASSENRGEKTAVLAALINKTNTQEMKWIIMIILKDLKLG 184
Query: 603 VSEKSIFHEFHPDAEDLFNVTCNLKLVCEKLRDRNQRHKRQDIEVGKPVRPQLALRVSNV 782
+SEKS+FHEFHPDAEDLFNVTC+LKLVCEKLRDRNQRHKRQDIEVGK VRPQLA+RVS+
Sbjct: 185 MSEKSVFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAMRVSDA 244
Query: 783 GASWKKLHGKEVVVECKFDGDRIQLHKNNLEMHFFSRNFLHHPEYEHAMSDIIANNILVD 962
A+WKKLHGKEVVVECKFDGDRIQ+HKN E+H+FSRNFL H EY H MSDII N+L +
Sbjct: 245 HAAWKKLHGKEVVVECKFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQNVLDE 304
Query: 963 RCILDGEMLVWDTSENRFADFGSNQEIAKATSEGLDNDRQLCYVAFDILYAGDTSVIHQS 1142
RCILDGEMLVWDTS NRFA+FGSNQEIAKA +GLD+DRQLCYVAFDILY GDTSVIHQ+
Sbjct: 305 RCILDGEMLVWDTSLNRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYVGDTSVIHQT 364
Query: 1143 LRERHDLLRKVVKPIKGRFEILVPDCGLSGNRHSGESRQSFVARSVDEVEKFFKETVENR 1322
L+ERH+LLRKVVKP+KGR EILVP+ GL+ +R GE S +A +VD++EKFFKET+ENR
Sbjct: 365 LKERHELLRKVVKPVKGRLEILVPNGGLNAHRLPGEPYCSLIAYNVDDIEKFFKETIENR 424
Query: 1323 DEGIIL 1340
DEGI+L
Sbjct: 425 DEGIVL 430
>ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi|297312022|gb|EFH42446.1|
ATLIG4 [Arabidopsis lyrata subsp. lyrata]
Length = 1221
Score = 631 bits (1627), Expect = e-178
Identities = 313/422 (74%), Positives = 360/422 (85%), Gaps = 3/422 (0%)
Frame = +3
Query: 84 DIKFSVMVSLFNWMQXXXXXXXXXXXXXXXLDAFCRKPGDYFSAIRLILPGLDRERGSYG 263
+IKFSV+VSLFNW+Q LD +C KP DYF A+RLI+P LDRERGSYG
Sbjct: 4 EIKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYC-KPSDYFVAVRLIIPSLDRERGSYG 62
Query: 264 LKEHVLATCLIDALGMSRDSPDAQRLLNWRKGGP-KTGASAGNFSLVASEVLQRRQGLTS 440
LKE VLATCLIDALG+SRD+PDA RLLNWRKGG K GA+AGNFSL+A+EVLQRRQG+ S
Sbjct: 63 LKESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMAS 122
Query: 441 GGLTLKQLNALLDRLASSDNR--AEKTSVLSDLIRVTNAHEMKWIIMIILKDLKLGVSEK 614
GGLT+K+LN LLDRLASS+NR AEKT VLS LI+ TNA EMKW+I IILKDLKLG+SEK
Sbjct: 123 GGLTVKELNDLLDRLASSENRCRAEKTLVLSTLIQKTNAQEMKWVIRIILKDLKLGMSEK 182
Query: 615 SIFHEFHPDAEDLFNVTCNLKLVCEKLRDRNQRHKRQDIEVGKPVRPQLALRVSNVGASW 794
SIF EFHPDAEDLFNVTC+LKLVCEKLRDR+QRHKRQDIEVGK VRPQLA+R+S+V A+W
Sbjct: 183 SIFQEFHPDAEDLFNVTCDLKLVCEKLRDRHQRHKRQDIEVGKAVRPQLAMRISDVNAAW 242
Query: 795 KKLHGKEVVVECKFDGDRIQLHKNNLEMHFFSRNFLHHPEYEHAMSDIIANNILVDRCIL 974
KKLHGK+VV ECKFDGDRIQ+HKN ++H+FSRNFL H EY HAMSD+I NILVD+CIL
Sbjct: 243 KKLHGKDVVAECKFDGDRIQIHKNGTDIHYFSRNFLDHSEYAHAMSDLIVQNILVDKCIL 302
Query: 975 DGEMLVWDTSENRFADFGSNQEIAKATSEGLDNDRQLCYVAFDILYAGDTSVIHQSLRER 1154
DGEMLVWDTS NRFA+FGSNQEIAKA EGLD+ +QLCYVAFD+LY GDTSVIHQSL+ER
Sbjct: 303 DGEMLVWDTSLNRFAEFGSNQEIAKAAREGLDSHKQLCYVAFDVLYVGDTSVIHQSLKER 362
Query: 1155 HDLLRKVVKPIKGRFEILVPDCGLSGNRHSGESRQSFVARSVDEVEKFFKETVENRDEGI 1334
H+LLRKVVKP+KGR E+LVP+ GL+ +R SGE S V + +VE+FFKETVENRDEG+
Sbjct: 363 HELLRKVVKPLKGRLEVLVPEGGLNVHRPSGEPSWSIVVHAAADVERFFKETVENRDEGV 422
Query: 1335 IL 1340
+L
Sbjct: 423 VL 424