BLASTX nr result

ID: Cephaelis21_contig00032948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032948
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-19
ref|XP_002525278.1| GTP binding protein, putative [Ricinus commu...    63   3e-17
ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-16
ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata] g...    58   1e-15
ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243...    59   1e-15

>ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
           chloroplastic-like [Glycine max]
          Length = 865

 Score = 62.8 bits (151), Expect(2) = 7e-19
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   QWKGVSWVFEQLRKSGLRPNGATYGLAME 87
           QWKGVSWVF+QLRKSGL+PNGATYGLAME
Sbjct: 339 QWKGVSWVFKQLRKSGLKPNGATYGLAME 367



 Score = 55.8 bits (133), Expect(2) = 7e-19
 Identities = 27/38 (71%), Positives = 29/38 (76%)
 Frame = +2

Query: 92  TGGAC*KVMLECGKYDLVHEFYGKMKRSGEALNALTYK 205
           T G   +VMLE G YDLVHEF+GKMKRSGE   ALTYK
Sbjct: 361 TYGLAMEVMLESGNYDLVHEFFGKMKRSGEVPKALTYK 398


>ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
           gi|223535436|gb|EEF37106.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 1010

 Score = 63.2 bits (152), Expect(2) = 3e-17
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   QWKGVSWVFEQLRKSGLRPNGATYGLAME 87
           QWKGV+WVFEQLRKSGL+PNGATYGLAME
Sbjct: 486 QWKGVAWVFEQLRKSGLKPNGATYGLAME 514



 Score = 50.1 bits (118), Expect(2) = 3e-17
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = +2

Query: 92  TGGAC*KVMLECGKYDLVHEFYGKMKRSGEALNALTYK 205
           T G   +VML  GKYDLVHE + KM RSGEA  ALTYK
Sbjct: 508 TYGLAMEVMLNSGKYDLVHELFRKMNRSGEAPKALTYK 545


>ref|XP_002310894.1| predicted protein [Populus trichocarpa] gi|222853797|gb|EEE91344.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score = 62.0 bits (149), Expect(2) = 4e-16
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +1

Query: 1   QWKGVSWVFEQLRKSGLRPNGATYGLAME 87
           QWKGVSWVF+QLR+SGL+PNGATYGLAME
Sbjct: 253 QWKGVSWVFQQLRRSGLKPNGATYGLAME 281



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +2

Query: 92  TGGAC*KVMLECGKYDLVHEFYGKMKRSGEALNALTYK 205
           T G   +VML  GKY  VHE++ KMK+SGE+L ALTYK
Sbjct: 275 TYGLAMEVMLLSGKYKSVHEYFRKMKKSGESLKALTYK 312


>ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata]
           gi|297312532|gb|EFH42956.1| EMB1408 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 621

 Score = 58.2 bits (139), Expect(2) = 1e-15
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   QWKGVSWVFEQLRKSGLRPNGATYGLAME 87
           QWK VSWVF +LRK+GLRPNGATYGLAME
Sbjct: 356 QWKAVSWVFVELRKNGLRPNGATYGLAME 384



 Score = 49.7 bits (117), Expect(2) = 1e-15
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +2

Query: 92  TGGAC*KVMLECGKYDLVHEFYGKMKRSGEALNALTYK 205
           T G   +VMLE GKYD VH+F+ KMK SGEA  A+TYK
Sbjct: 378 TYGLAMEVMLESGKYDRVHDFFRKMKSSGEAPKAITYK 415


>ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243336 [Vitis vinifera]
          Length = 609

 Score = 58.5 bits (140), Expect(2) = 1e-15
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   QWKGVSWVFEQLRKSGLRPNGATYGLAME 87
           QWKGVSWVF+QLRK  L+PNGATYGLAME
Sbjct: 396 QWKGVSWVFKQLRKCSLKPNGATYGLAME 424



 Score = 49.3 bits (116), Expect(2) = 1e-15
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = +2

Query: 92  TGGAC*KVMLECGKYDLVHEFYGKMKRSGEALNALTYK 205
           T G   +VML+ GKYD VH F+ KM+RSGEA  ALTYK
Sbjct: 418 TYGLAMEVMLQSGKYDHVHRFFEKMRRSGEAPKALTYK 455


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