BLASTX nr result

ID: Cephaelis21_contig00032946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032946
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223...   131   6e-29
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   129   2e-28
emb|CBI32804.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   127   7e-28
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   125   5e-27

>ref|XP_002535194.1| helicase, putative [Ricinus communis] gi|223523786|gb|EEF27189.1|
           helicase, putative [Ricinus communis]
          Length = 518

 Score =  131 bits (329), Expect = 6e-29
 Identities = 61/82 (74%), Positives = 69/82 (84%)
 Frame = +2

Query: 2   KKIDWRRVILDEAHVIKNVNALQSRAVRKLKAKRRWIVTGTPIQNHSFDLFSQLAFLRFE 181
           K ++W RVILDEAHVIKN NA QSRAV  L AKRRW+VTGTPIQN SFDLFS +AFLRFE
Sbjct: 419 KMVEWWRVILDEAHVIKNANAQQSRAVTNLNAKRRWVVTGTPIQNGSFDLFSLMAFLRFE 478

Query: 182 PLSIKNYWNSLIARPISSGDQK 247
           P SIKNYW SL+ RP++ GD+K
Sbjct: 479 PFSIKNYWQSLVQRPLAQGDKK 500


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222854852|gb|EEE92399.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 799

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   KKIDWRRVILDEAHVIKNVNALQSRAVRKLKAKRRWIVTGTPIQNHSFDLFSQLAFLRFE 181
           KKIDW RVILDEAHVIKN N+ QSRAV KL AKRRW+VTGTPIQN S DLFS +AFLRFE
Sbjct: 347 KKIDWCRVILDEAHVIKNANSQQSRAVTKLNAKRRWVVTGTPIQNGSLDLFSLMAFLRFE 406

Query: 182 PLSIKNYWNSLIARPISSGDQK 247
           P SIK+YW SL+ RP++ G++K
Sbjct: 407 PFSIKSYWQSLLQRPLAQGNKK 428


>emb|CBI32804.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/82 (71%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   KKIDWRRVILDEAHVIKNVNALQSRAVRKLKAKRRWIVTGTPIQNHSFDLFSQLAFLRFE 181
           KKI+W RVILDEAH+IKNVNA QS+AV  L+AKRRW+VTGTPIQN +FDLFS +AFLRFE
Sbjct: 314 KKIEWWRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFLRFE 373

Query: 182 PLSIKNYWNSLIARPISSGDQK 247
           P SIK+YW SL+ RP+  G +K
Sbjct: 374 PFSIKSYWQSLVQRPLGQGKEK 395


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 1-like [Vitis vinifera]
          Length = 874

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/82 (71%), Positives = 70/82 (85%)
 Frame = +2

Query: 2   KKIDWRRVILDEAHVIKNVNALQSRAVRKLKAKRRWIVTGTPIQNHSFDLFSQLAFLRFE 181
           KKI+W RVILDEAH+IKNVNA QS+AV  L+AKRRW+VTGTPIQN +FDLFS +AFLRFE
Sbjct: 422 KKIEWWRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFLRFE 481

Query: 182 PLSIKNYWNSLIARPISSGDQK 247
           P SIK+YW SL+ RP+  G +K
Sbjct: 482 PFSIKSYWQSLVQRPLGQGKEK 503


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316976|gb|EFH47398.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/82 (70%), Positives = 67/82 (81%)
 Frame = +2

Query: 2   KKIDWRRVILDEAHVIKNVNALQSRAVRKLKAKRRWIVTGTPIQNHSFDLFSQLAFLRFE 181
           KK++W R+ILDEAH IKN NA QSR V KLKA RRW VTGTPIQN SFDL+S +AFLRFE
Sbjct: 407 KKMEWLRIILDEAHTIKNANAQQSRVVSKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFE 466

Query: 182 PLSIKNYWNSLIARPISSGDQK 247
           P SIK+YW SLI RP+  G++K
Sbjct: 467 PFSIKSYWQSLIQRPLGQGNKK 488


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