BLASTX nr result
ID: Cephaelis21_contig00032892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00032892
(552 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34375.3| unnamed protein product [Vitis vinifera] 177 7e-43
ref|XP_002299515.1| predicted protein [Populus trichocarpa] gi|2... 108 6e-22
ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp.... 97 2e-18
ref|NP_180924.1| pentatricopeptide repeat-containing protein [Ar... 96 4e-18
ref|XP_002879464.1| pentatricopeptide repeat-containing protein ... 94 1e-17
>emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 177 bits (450), Expect = 7e-43
Identities = 87/184 (47%), Positives = 129/184 (70%), Gaps = 2/184 (1%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGL--ELNEF 176
Y+K G + AE+CF++ + DSVVWT+M+ G+V N + ++ + F EMR LGL ELNEF
Sbjct: 162 YAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEF 221
Query: 177 TLTTLVSGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEENP 356
+LT+++ + +V+ G+Q+ G S+K+G L G SI LNNA+M+MY R G + DAI +F+E
Sbjct: 222 SLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMT 281
Query: 357 DPDVVSWAERIGVAYDGVDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGELVHL 536
+PDVVSW ERIG AYD ++A E+F+ +S +EVNEY +IN+LS + ++LK G +
Sbjct: 282 EPDVVSWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQG 341
Query: 537 YCYK 548
C K
Sbjct: 342 LCQK 345
Score = 71.2 bits (173), Expect = 1e-10
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
YS+ G A + F + D V WT I D + EA FR + +E+NE+ L
Sbjct: 264 YSRCGSKSDAIKMFDEMTEPDVVSWTERIGA--AYDAI-EAFELFRLVLSGNMEVNEYML 320
Query: 183 TTLVSGVFEVKV---GQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
++S + E K+ G+QI G K G+L S+ NNA++ MYG+ G V A +F+E
Sbjct: 321 INVLSAMREPKLLKSGRQIQGLCQKAGYLLVASV--NNALIFMYGKCGEMVAARHIFDEM 378
Query: 354 PDPDVVSWAERI-GVAYDGV--DALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGE 524
D VSW I G A +G+ AL+VF L+ N+YT+ ++L S +
Sbjct: 379 LCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAM 438
Query: 525 LVHLYCYK 548
+H Y K
Sbjct: 439 QIHSYIVK 446
Score = 64.3 bits (155), Expect = 1e-08
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
++ +G A R D D+V W S+I+GY + F +R GL +EF+L
Sbjct: 65 FAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSL 124
Query: 183 TTLVSGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEENPDP 362
++LV G ++ + HG LK+G LNGF + + ++ Y ++G A F+E
Sbjct: 125 SSLVKGCGVLEQNEVAHGVCLKMGLLNGFVV---SGLLDGYAKLGDVDSAEKCFKEFYIA 181
Query: 363 DVVSWAERI-GVAYDG--VDALEVF--QFCISRCLEVNEYTIINMLSKI----EGSEMLK 515
D V W + G ++G EVF + LE+NE+++ ++L + EG ++
Sbjct: 182 DSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVREGEQVFG 241
Query: 516 LGELVHLYC 542
L + L C
Sbjct: 242 LSVKMGLLC 250
Score = 60.8 bits (146), Expect = 1e-07
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
Y K G + A F + C DSV W S+I GY N + +A F +MR+ L+ N++TL
Sbjct: 362 YGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTL 421
Query: 183 TTLVSGVFE---VKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
+++ + QIH + +K+GF+ S+ + +++ YG+ ++ V+ +
Sbjct: 422 ASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSML--SCLITAYGKCNMICESKRVYSDI 479
Query: 354 PDPDVV---SWAERIGVAYDGVDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGE 524
+V+ + A + A DAL++FQ EV+ T+ +L L+ G
Sbjct: 480 SQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGR 539
Query: 525 LVHLYCYKN 551
+H K+
Sbjct: 540 NIHSMALKS 548
>ref|XP_002299515.1| predicted protein [Populus trichocarpa] gi|222846773|gb|EEE84320.1|
predicted protein [Populus trichocarpa]
Length = 568
Score = 108 bits (270), Expect = 6e-22
Identities = 53/100 (53%), Positives = 71/100 (71%)
Frame = +3
Query: 249 IGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEENPDPDVVSWAERIGVAYDGVDALEVF 428
+GFL G S+ +NA+MSMY R G VDAI VF+E +PDVVSW ERIG A DG +A+E+F
Sbjct: 1 MGFLRGSSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDGHEAVELF 60
Query: 429 QFCISRCLEVNEYTIINMLSKIEGSEMLKLGELVHLYCYK 548
+ +S L+VNEYT+IN+LS I G + L G+ + C+K
Sbjct: 61 RIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHK 100
Score = 62.4 bits (150), Expect = 5e-08
Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Frame = +3
Query: 63 DSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTLTTLVS---GVFEVKVGQQIH 233
D V WT I +D EA FR + LGL++NE+TL ++S GV + G+QI
Sbjct: 39 DVVSWTERIG--TASDG-HEAVELFRIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQ 95
Query: 234 GFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEENPDPDVVSWAERIGVAYDG-- 407
K G+ S+ +NA++SMYG+ G DA VF D VSW I +
Sbjct: 96 ALCHKTGYFQVVSV--SNALVSMYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGF 153
Query: 408 -VDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGELVH 533
ALEVF L+ +T+ ++L + S K +H
Sbjct: 154 VNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIH 196
Score = 57.0 bits (136), Expect = 2e-06
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 6/183 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
Y K G + A R F + DSV W S+I+ N +++A F +MREL L+ TL
Sbjct: 117 YGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTL 176
Query: 183 TTL---VSGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
++ VS K QIH +K GF+ F + + + +++ YGR ++ VF E
Sbjct: 177 ASILEAVSNSNNTKQVIQIHSLVVKCGFM--FDVSMISCLITAYGRCNSMDESKRVFAEI 234
Query: 354 PDPDVVSWAERIGV---AYDGVDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGE 524
++V I A DAL ++Q S +V+ T +L ++LG
Sbjct: 235 DKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGR 294
Query: 525 LVH 533
VH
Sbjct: 295 AVH 297
>ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 96.7 bits (239), Expect = 2e-18
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
YS G R F D V WT+MI+G+V ND EA F EM+ G+ NE T+
Sbjct: 148 YSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTV 207
Query: 183 TTLVSG---VFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
+++ +V+ G+ IHGF L+ G + + + ++++ MYG+ GC DA VF+E
Sbjct: 208 VSVLKATRKAEDVRFGRSIHGFYLEAGRVR-CDVFIGSSLVDMYGKCGCYDDAQKVFDEM 266
Query: 354 PDPDVVSWAERIGVAYDG---VDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGE 524
P +VV+W I G + VF+ + + NE T+ ++LS L G
Sbjct: 267 PSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGR 326
Query: 525 LVHLYCYKN 551
VH Y KN
Sbjct: 327 RVHCYVIKN 335
Score = 66.6 bits (161), Expect = 2e-09
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 6/184 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
Y K G A++ F + + V WT++I GYV ++ F EM + + NE TL
Sbjct: 250 YGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTL 309
Query: 183 TTLVSGVFEVKV---GQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
++++S V G+++H + +K + + ++ Y + GC +AI VFE
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYVIKNSI--EINTTVGTTLIDFYAKCGCLEEAILVFERL 367
Query: 354 PDPDVVSWAERI-GVAYDG--VDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGE 524
+ +V +W I G A G + A+++F +S + NE T I +LS +++ G
Sbjct: 368 REKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGR 427
Query: 525 LVHL 536
+ L
Sbjct: 428 RLFL 431
>ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g33680 gi|1707007|gb|AAC69139.1| hypothetical protein
[Arabidopsis thaliana] gi|330253774|gb|AEC08868.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 727
Score = 95.9 bits (237), Expect = 4e-18
Identities = 55/168 (32%), Positives = 100/168 (59%), Gaps = 6/168 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
Y+K G L A + F D +WTS+I+GYV N +EA + +R M+ G+ N+ T+
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 183 TTLV---SGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
+++ S + +++G+Q+HG ++K GF G + + +A+ +MY + G D VF
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYSKCGSLEDGNLVFRRT 484
Query: 354 PDPDVVSWAERI-GVAYDGV--DALEVFQFCISRCLEVNEYTIINMLS 488
P+ DVVSW I G++++G +ALE+F+ ++ +E ++ T +N++S
Sbjct: 485 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Score = 73.6 bits (179), Expect = 2e-11
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
YSK L A + F + +S+ W++M+ GY N + EA F M G++ +E+T+
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 183 TTLV---SGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
++ S + ++ G+Q+H F LK+GF + A++ MY + GC DA F+
Sbjct: 326 VGVLNACSDICYLEEGKQLHSFLLKLGFER--HLFATTALVDMYAKAGCLADARKGFDCL 383
Query: 354 PDPDVVSWAERIG---VAYDGVDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGE 524
+ DV W I D +AL +++ + + N+ T+ ++L L+LG+
Sbjct: 384 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 525 LVHLYCYKN 551
VH + K+
Sbjct: 444 QVHGHTIKH 452
Score = 67.8 bits (164), Expect = 1e-09
Identities = 48/191 (25%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFR---EMRELGLELNE 173
Y K G + + F ++ W++M++GY +++EA F +E G + ++
Sbjct: 163 YCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD-SD 221
Query: 174 FTLTTLVSGV---FEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVF 344
+ T ++S + V +G+QIH ++K G L GF + L+NA+++MY + +A +F
Sbjct: 222 YVFTAVLSSLAATIYVGLGRQIHCITIKNGLL-GF-VALSNALVTMYSKCESLNEACKMF 279
Query: 345 EENPDPDVVSWAERI-GVAYDG--VDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLK 515
+ + D + ++W+ + G + +G ++A+++F S ++ +EYTI+ +L+ L+
Sbjct: 280 DSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLE 339
Query: 516 LGELVHLYCYK 548
G+ +H + K
Sbjct: 340 EGKQLHSFLLK 350
Score = 64.7 bits (156), Expect = 9e-09
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVA---FREMRELGLELNE 173
Y+K G L A F C D V W S+I GY N + + FREMR + N
Sbjct: 59 YAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNA 118
Query: 174 FTLTTLVSGVFEVK-------VGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDA 332
+TL +G+F+ + VG+Q H +K+ I ++ +++ MY + G D
Sbjct: 119 YTL----AGIFKAESSLQSSTVGRQAHALVVKMSSFG--DIYVDTSLVGMYCKAGLVEDG 172
Query: 333 ISVFEENPDPDVVSWAERI-GVAYDG--VDALEVFQFCISRCLE--VNEYTIINMLSKIE 497
+ VF P+ + +W+ + G A G +A++VF + E ++Y +LS +
Sbjct: 173 LKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA 232
Query: 498 GSEMLKLGELVHLYCYKN 551
+ + LG +H KN
Sbjct: 233 ATIYVGLGRQIHCITIKN 250
>ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325303|gb|EFH55723.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 713
Score = 94.0 bits (232), Expect = 1e-17
Identities = 55/168 (32%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
Y+K G L A + F D +WTS+I+GYV N +EA + +R M+ G+ N+ T+
Sbjct: 356 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 415
Query: 183 TTLV---SGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
+++ S + +++G+Q+HG ++K GF G + + +A+ +MY + G D VF
Sbjct: 416 ASVLKACSSLATLELGKQVHGHTIKHGF--GLEVPIGSALSTMYTKCGSLEDGNLVFRRT 473
Query: 354 PDPDVVSWAERI-GVAYDGV--DALEVFQFCISRCLEVNEYTIINMLS 488
P+ DVVSW I G++++G +ALE+F+ ++ E ++ T +N++S
Sbjct: 474 PNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIIS 521
Score = 72.0 bits (175), Expect = 6e-11
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 6/189 (3%)
Frame = +3
Query: 3 YSKTGFLRCAERCFQDNWCLDSVVWTSMINGYVCNDKLDEAKVAFREMRELGLELNEFTL 182
YSK L A + F + +S+ W++M+ GY N + EA F M G++ +E+T+
Sbjct: 255 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTI 314
Query: 183 TTLV---SGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEEN 353
++ S + + G+Q+H F LK+GF + A++ MY + GC DA F+
Sbjct: 315 VGVLNACSDICYLVEGKQLHSFLLKLGFER--HLFATTALVDMYAKAGCLADARKGFDCL 372
Query: 354 PDPDVVSWAERIG---VAYDGVDALEVFQFCISRCLEVNEYTIINMLSKIEGSEMLKLGE 524
+ DV W I D +AL +++ + + N+ T+ ++L L+LG+
Sbjct: 373 QERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 432
Query: 525 LVHLYCYKN 551
VH + K+
Sbjct: 433 QVHGHTIKH 441
Score = 58.5 bits (140), Expect = 7e-07
Identities = 41/134 (30%), Positives = 81/134 (60%), Gaps = 14/134 (10%)
Frame = +3
Query: 180 LTTLVSGVFEVKVGQQIHGFSLKIGFLNGFSICLNNAIMSMYGRIGCRVDAISVFEENPD 359
L++L + V+ V +G+QIHG ++K G L GF + L+NA+++MY + +A +F+ + D
Sbjct: 217 LSSLAATVY-VGLGRQIHGITVKNGLL-GF-VALSNALVTMYSKCESLNEACKMFDSSGD 273
Query: 360 PDVVSWAERI-GVAYDG--VDALEVFQFCISRCLEVNEYTIINMLSK-------IEGSE- 506
+ ++W+ + G + +G ++A+++F S ++ +EYTI+ +L+ +EG +
Sbjct: 274 RNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQL 333
Query: 507 ---MLKLGELVHLY 539
+LKLG HL+
Sbjct: 334 HSFLLKLGFERHLF 347