BLASTX nr result
ID: Cephaelis21_contig00032773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00032773
(1067 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi... 94 6e-18
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo... 94 6e-18
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ... 94 6e-18
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze... 97 9e-18
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 86 1e-16
>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
Length = 1546
Score = 94.4 bits (233), Expect(2) = 6e-18
Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Frame = +3
Query: 429 YKIGDGRKVKVWEDSWLPNSIDGKVKSQRVPGSRLCYVSDQIDD---FSWNSPLLQANLR 599
+++GDG ++K+WED+W+P S + K+++ R G+ L D++ D F+W LL+
Sbjct: 569 WRVGDGTQIKIWEDNWIPGSHNMKIQTNR--GNNLVATVDELIDPINFTWGGDLLKTIFW 626
Query: 600 EDEVQEILQIPLRREECSDKLYWPHSKSGNYTVKSGYSRAKTMNDNKKEPRIHEAITSRN 779
+V I+QIP+R D + W +++SG ++VKS Y ++ ++ + SR+
Sbjct: 627 PIDVCRIMQIPIRAGR-DDLVAWQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTASRS 685
Query: 780 MKEPRVWKSVWDLEVKNKLKHFVWKCLHRAVPVNDELQQR 899
R+WK +W+L+V K+K F W+ L VP L R
Sbjct: 686 ----RLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANR 721
Score = 23.5 bits (49), Expect(2) = 6e-18
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 920 CKIVA*RRKQLEHLFFFCPRAVDVW 994
C + + ++H+ F C RA VW
Sbjct: 729 CPVCQNGPEDIKHMIFTCARAKQVW 753
>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
Length = 1395
Score = 94.4 bits (233), Expect(2) = 6e-18
Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Frame = +3
Query: 429 YKIGDGRKVKVWEDSWLPNSIDGKVKSQRVPGSRLCYVSDQIDD---FSWNSPLLQANLR 599
+++GDG ++K+WED+W+P S + K+++ R G+ L D++ D F+W LL+
Sbjct: 418 WRVGDGTQIKIWEDNWIPGSHNMKIQTNR--GNNLVATVDELIDPINFTWGGDLLKTIFW 475
Query: 600 EDEVQEILQIPLRREECSDKLYWPHSKSGNYTVKSGYSRAKTMNDNKKEPRIHEAITSRN 779
+V I+QIP+R D + W +++SG ++VKS Y ++ ++ + SR+
Sbjct: 476 PIDVCRIMQIPIRAGR-DDLVAWQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTASRS 534
Query: 780 MKEPRVWKSVWDLEVKNKLKHFVWKCLHRAVPVNDELQQR 899
R+WK +W+L+V K+K F W+ L VP L R
Sbjct: 535 ----RLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANR 570
Score = 23.5 bits (49), Expect(2) = 6e-18
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 920 CKIVA*RRKQLEHLFFFCPRAVDVW 994
C + + ++H+ F C RA VW
Sbjct: 578 CPVCQNGPEDIKHMIFTCARAKQVW 602
>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1378
Score = 94.4 bits (233), Expect(2) = 6e-18
Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Frame = +3
Query: 429 YKIGDGRKVKVWEDSWLPNSIDGKVKSQRVPGSRLCYVSDQIDD---FSWNSPLLQANLR 599
+++GDG ++K+WED+W+P S + K+++ R G+ L D++ D F+W LL+
Sbjct: 388 WRVGDGTQIKIWEDNWIPGSHNMKIQTNR--GNNLVATVDELIDPINFTWGGDLLKTIFW 445
Query: 600 EDEVQEILQIPLRREECSDKLYWPHSKSGNYTVKSGYSRAKTMNDNKKEPRIHEAITSRN 779
+V I+QIP+R D + W +++SG ++VKS Y ++ ++ + SR+
Sbjct: 446 PIDVCRIMQIPIRAGR-DDLVAWQYNRSGTFSVKSAYHCQWDYKFGERSAQMQASTASRS 504
Query: 780 MKEPRVWKSVWDLEVKNKLKHFVWKCLHRAVPVNDELQQR 899
R+WK +W+L+V K+K F W+ L VP L R
Sbjct: 505 ----RLWKRLWNLKVPAKIKIFGWRALKGLVPCRAILANR 540
Score = 23.5 bits (49), Expect(2) = 6e-18
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 920 CKIVA*RRKQLEHLFFFCPRAVDVW 994
C + + ++H+ F C RA VW
Sbjct: 548 CPVCQNGPEDIKHMIFTCARAKQVW 572
>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
Length = 472
Score = 96.7 bits (239), Expect = 9e-18
Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Frame = +3
Query: 423 LRYKIGDGRKVKVWEDSWLPNSIDGKVKSQRVPGSRLCYVSDQIDDF--SWNSPLLQANL 596
L ++IGDG +V +W D W+P +V + R GS L V++ ID SW+ L++
Sbjct: 29 LIWRIGDGNQVNIWVDPWIPRGETRRVITPR-NGSLLHKVAELIDPITGSWDCRLVRDTF 87
Query: 597 REDEVQEILQIPLRREECSDKLYWPHSKSGNYTVKSGYSRAKTMNDNKKEPRIHEAITSR 776
+++ IL IP++ E D L W GN++VKS Y+ A D+ +I+ R
Sbjct: 88 LQEDADCILAIPIQ-EGMEDTLAWHGDPKGNFSVKSAYALASRRRDHHNNADASSSISGR 146
Query: 777 NMKEPRVWKSVWDLEVKNKLKHFVWKCLHRAVPVNDELQQRTKMRDGFAKLWLR---EGN 947
VWKS+W++ V NK+K F+W+ H + PV + +R + + R +G
Sbjct: 147 G---ENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIARRGIKIETLCPMCFRLDEDGG 203
Query: 948 NWNTCSSFVQEQWMC 992
+ V++ W C
Sbjct: 204 HLFLKCKKVKQVWRC 218
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 85.5 bits (210), Expect(2) = 1e-16
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Frame = +3
Query: 417 KELRYKIGDGRKVKVWEDSWLPNSIDGKVKSQR---VPGSRLCYVSDQIDDFSWNSPLLQ 587
K +R+ +GDG+ +K++ D+W+P V + + C +++ D W+ L++
Sbjct: 935 KGVRWGVGDGKTIKIFSDNWIPGFRPQLVTTLSPFPTDATVSCLMNE--DARCWDGDLIR 992
Query: 588 ANLREDEVQEILQIPLRREECSDKLYWPHSKSGNYTVKSGYSRAKTMNDNKKEPRIHEAI 767
+ D +EILQIP+ R +D WPH K G Y+V+S Y+ A++ + +
Sbjct: 993 SLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGM 1052
Query: 768 TSRNMKEPRVWKSVWDLEVKNKLKHFVWKCLHRAVPVNDELQQR 899
SR ++ + WK +W + K+K +W+ H + +L++R
Sbjct: 1053 ASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLRRR 1096
Score = 27.7 bits (60), Expect(2) = 1e-16
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 938 RRKQLEHLFFFCPRAVDVWK 997
R +EH+F FCP A +W+
Sbjct: 1109 RDDTVEHVFLFCPFAAQIWE 1128