BLASTX nr result

ID: Cephaelis21_contig00032634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00032634
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871168.1| hypothetical protein ARALYDRAFT_487351 [Arab...    46   4e-09
ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidops...    46   4e-09
ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-09
emb|CBI25461.3| unnamed protein product [Vitis vinifera]               52   1e-08
ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...    52   1e-08

>ref|XP_002871168.1| hypothetical protein ARALYDRAFT_487351 [Arabidopsis lyrata subsp.
           lyrata] gi|297317005|gb|EFH47427.1| hypothetical protein
           ARALYDRAFT_487351 [Arabidopsis lyrata subsp. lyrata]
          Length = 1748

 Score = 46.2 bits (108), Expect(3) = 4e-09
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
 Frame = -1

Query: 533 LDHCMRDFPSLSNDLRICQ-LS*SNKAPSLFRWLECCLQHG 414
           LD+ +RDFP LS  +  C  LS S K P+LFRWLE CL+ G
Sbjct: 624 LDYYIRDFPRLSTTIGACTTLSSSRKPPNLFRWLENCLRRG 664



 Score = 31.2 bits (69), Expect(3) = 4e-09
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -3

Query: 231 AME*FGLQQ*DLLLAGVSLPLQH 163
           A E FGL Q DLL +GVSLPL+H
Sbjct: 733 AGERFGLHQLDLLPSGVSLPLRH 755



 Score = 28.9 bits (63), Expect(3) = 4e-09
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 406 SANASVLPLLNLKDGGSAMNWAREMVSF 323
           S N   LP L  +DG S ++WAR++VSF
Sbjct: 667 STNFDDLPDLIRRDGCSIVSWARKVVSF 694


>ref|NP_196175.1| anaphase-promoting complex subunit 1 [Arabidopsis thaliana]
           gi|75170223|sp|Q9FFF9.1|APC1_ARATH RecName:
           Full=Anaphase-promoting complex subunit 1; AltName:
           Full=Cyclosome subunit 1; AltName: Full=Protein EMBRYO
           DEFECTIVE 2771 gi|10178133|dbj|BAB11545.1| meiotic check
           point regulator-like protein [Arabidopsis thaliana]
           gi|332003506|gb|AED90889.1| anaphase-promoting complex
           subunit 1 [Arabidopsis thaliana]
          Length = 1678

 Score = 46.2 bits (108), Expect(3) = 4e-09
 Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
 Frame = -1

Query: 533 LDHCMRDFPSLSNDLRICQ-LS*SNKAPSLFRWLECCLQHG 414
           LD+ +RDFP LS  +  C  LS S K P+LFRWLE CL+ G
Sbjct: 623 LDYYIRDFPRLSTTIGACTTLSSSRKPPNLFRWLENCLRRG 663



 Score = 31.2 bits (69), Expect(3) = 4e-09
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -3

Query: 231 AME*FGLQQ*DLLLAGVSLPLQH 163
           A E FGL Q DLL +GVSLPL+H
Sbjct: 732 AGERFGLHQLDLLPSGVSLPLRH 754



 Score = 28.9 bits (63), Expect(3) = 4e-09
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 406 SANASVLPLLNLKDGGSAMNWAREMVSF 323
           S N   LP L  +DG S ++WAR++VSF
Sbjct: 666 STNFDDLPDLIRRDGCSIVSWARKVVSF 693


>ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1|
           predicted protein [Populus trichocarpa]
          Length = 1929

 Score = 56.6 bits (135), Expect(2) = 4e-09
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = -1

Query: 533 LDHCMRDFPSLSNDLRICQLS*SNKAP-SLFRWLECCLQHGF*XXXXXXXXXXXFEGRRF 357
           LDH +RDFP L + +  C++  S K P SLFRWLE C+QHG              +   F
Sbjct: 642 LDHYIRDFPGLISKIGTCEMPFSQKTPPSLFRWLENCMQHGCSSANTDDLPPLICKDGNF 701

Query: 356 CYELGQGNGFF*HSVTWCLNMRKRLSSGVFCNVVYAS 246
                +    F   +       K+LSSGV+CN+   S
Sbjct: 702 VVSWARKIVSFYSLLCGGKQTGKKLSSGVYCNIAMGS 738



 Score = 30.4 bits (67), Expect(2) = 4e-09
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -3

Query: 225 E*FGLQQ*DLLLAGVSLPLQH 163
           E FGLQQ D L +GVSLPL+H
Sbjct: 753 ERFGLQQLDSLPSGVSLPLRH 773


>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score = 51.6 bits (122), Expect(2) = 1e-08
 Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
 Frame = -1

Query: 533  LDHCMRDFPSLSNDLRICQLS*SNKAP-SLFRWLECCLQHGF*XXXXXXXXXXXFEGRRF 357
            LDH +RDFP +S  L +C+   S   P SLFRWLE CLQ+G              +    
Sbjct: 743  LDHYVRDFPGISKKLGMCKACLSQTTPPSLFRWLEHCLQYGCNSANINDLPPLIRKDG-- 800

Query: 356  CYELGQGNGFF*HSVTWCLNM-------------RKRLSSGVFCNVVYASSS 240
                        HSV W   +              ++LSSGV+CN+   SSS
Sbjct: 801  ------------HSVIWARKIVSFYSLLSGAKQAGRKLSSGVYCNLATGSSS 840



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -3

Query: 225 E*FGLQQ*DLLLAGVSLPLQH 163
           E FGLQQ DLL AGVSLPL+H
Sbjct: 853 EKFGLQQLDLLPAGVSLPLRH 873


>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis
           vinifera]
          Length = 1716

 Score = 51.6 bits (122), Expect(2) = 1e-08
 Identities = 37/112 (33%), Positives = 48/112 (42%), Gaps = 14/112 (12%)
 Frame = -1

Query: 533 LDHCMRDFPSLSNDLRICQLS*SNKAP-SLFRWLECCLQHGF*XXXXXXXXXXXFEGRRF 357
           LDH +RDFP +S  L +C+   S   P SLFRWLE CLQ+G              +    
Sbjct: 640 LDHYVRDFPGISKKLGMCKACLSQTTPPSLFRWLEHCLQYGCNSANINDLPPLIRKDG-- 697

Query: 356 CYELGQGNGFF*HSVTWCLNM-------------RKRLSSGVFCNVVYASSS 240
                       HSV W   +              ++LSSGV+CN+   SSS
Sbjct: 698 ------------HSVIWARKIVSFYSLLSGAKQAGRKLSSGVYCNLATGSSS 737



 Score = 33.9 bits (76), Expect(2) = 1e-08
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = -3

Query: 225 E*FGLQQ*DLLLAGVSLPLQH 163
           E FGLQQ DLL AGVSLPL+H
Sbjct: 750 EKFGLQQLDLLPAGVSLPLRH 770


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