BLASTX nr result

ID: Cephaelis21_contig00030920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030920
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    84   9e-15
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]    84   9e-15
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...    70   2e-10

>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = +1

Query: 115 DNDEMGVSGDNVVDADELEKTDKIEDMAQKLEDLLSLLQSSGYGK-SIESSLEDMGLALN 291
           +ND   + G  V    +L+K++  E    KLE +LSLLQSSG    S+ESS   MGL+LN
Sbjct: 94  ENDGTQIEGFEV----DLDKSEGFEVDLDKLESVLSLLQSSGDAVGSLESSFNAMGLSLN 149

Query: 292 EKFVLRVLETPFIPGENLIGFFRWVFRKNEILVTKEA 402
           E+FV+RVLETPF+P  NLIGFF+W ++     VT  A
Sbjct: 150 EEFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRA 186


>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
 Frame = +1

Query: 115 DNDEMGVSGDNVVDADELEKTDKIEDMAQKLEDLLSLLQSSGYGK-SIESSLEDMGLALN 291
           +ND   + G  V    +L+K++  E    KLE +LSLLQSSG    S+ESS   MGL+LN
Sbjct: 94  ENDGTQIEGFEV----DLDKSEGFEVDLDKLESVLSLLQSSGDAVGSLESSFNAMGLSLN 149

Query: 292 EKFVLRVLETPFIPGENLIGFFRWVFRKNEILVTKEA 402
           E+FV+RVLETPF+P  NLIGFF+W ++     VT  A
Sbjct: 150 EEFVVRVLETPFVPANNLIGFFKWSWKNPGFSVTTRA 186


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/98 (41%), Positives = 64/98 (65%)
 Frame = +1

Query: 109 NGDNDEMGVSGDNVVDADELEKTDKIEDMAQKLEDLLSLLQSSGYGKSIESSLEDMGLAL 288
           +GD   + ++G+  V+++  E         +KLE++L LLQSS  G S+ES+L+   L L
Sbjct: 6   SGDVSVVSLAGEENVESETYEID------VEKLENVLHLLQSSDDG-SLESTLDTFSLDL 58

Query: 289 NEKFVLRVLETPFIPGENLIGFFRWVFRKNEILVTKEA 402
           +E+FV++VLETP + GENLI FF+W  +K ++ VT  A
Sbjct: 59  HEEFVVKVLETPHVLGENLIRFFKWAMKKQDLSVTTRA 96


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
           gi|449477884|ref|XP_004155152.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Cucumis sativus]
          Length = 479

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/76 (53%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = +1

Query: 139 GDNVVDADEL-EKTDKIEDMAQKLEDLLSLLQSSGYGKSIESSLEDMGLALNEKFVLRVL 315
           G+NVV +D + E+ +      ++LE +LSL+QS+  G S ESSL++M L LNE FVL+V+
Sbjct: 11  GENVVVSDGIGEEVESYGVNVEQLESVLSLIQSTVDG-SFESSLDEMRLTLNEDFVLKVI 69

Query: 316 ETPFIPGENLIGFFRW 363
           ETP I GENLI FFRW
Sbjct: 70  ETPHILGENLIRFFRW 85


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/66 (56%), Positives = 50/66 (75%)
 Frame = +1

Query: 196 AQKLEDLLSLLQSSGYGKSIESSLEDMGLALNEKFVLRVLETPFIPGENLIGFFRWVFRK 375
           A KLE++LSLLQSS    S+ESSL++M L L+E F+++VLETP I G+NLI FF W  ++
Sbjct: 138 ADKLENVLSLLQSST-DASLESSLDNMDLHLHEDFIVKVLETPLIVGDNLIKFFNWAIKQ 196

Query: 376 NEILVT 393
            +I VT
Sbjct: 197 PDINVT 202


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