BLASTX nr result

ID: Cephaelis21_contig00030846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030846
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34923.1| unknown [Lotus japonicus]                              170   2e-40
ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vini...   167   2e-39
gb|AAM34784.1|AF510671_1 HDA2 [Arabidopsis thaliana]                  164   1e-38
gb|AAD40129.1|AF149413_10 contains similarity to histone deacety...   164   1e-38
ref|NP_568480.2| histone deacetylase 2 [Arabidopsis thaliana] gi...   164   1e-38

>gb|AFK34923.1| unknown [Lotus japonicus]
          Length = 348

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/105 (80%), Positives = 93/105 (88%)
 Frame = -2

Query: 637 TGTSTSDYLSKLDEALEVASRNFDPELIVYNAGTDILDGDPLGRLKISPDGIATRDEKVF 458
           +GT T +YL KLDEALEVA+R F PEL++YNAGTDILDGDPLGRLKISPDGIA RDEKVF
Sbjct: 242 SGTLTEEYLQKLDEALEVAARRFKPELVIYNAGTDILDGDPLGRLKISPDGIALRDEKVF 301

Query: 457 RFANERKIPLVMLTSGGYMKSSARVIADSIINLSKKSLIELQCSP 323
           RFA E+ IP+VMLTSGGYMKSSARVIADSI+NLSKK LIE +  P
Sbjct: 302 RFAREKNIPIVMLTSGGYMKSSARVIADSIVNLSKKCLIETRGGP 346


>ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vinifera]
           gi|296081627|emb|CBI20632.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  167 bits (422), Expect = 2e-39
 Identities = 79/100 (79%), Positives = 95/100 (95%)
 Frame = -2

Query: 637 TGTSTSDYLSKLDEALEVASRNFDPELIVYNAGTDILDGDPLGRLKISPDGIATRDEKVF 458
           +GT+T++YL+KLDEAL+VA R FDPEL+VYNAGTDILDGDPLGRLKISP+G+ +RDEKVF
Sbjct: 252 SGTTTNEYLTKLDEALKVAGRMFDPELVVYNAGTDILDGDPLGRLKISPEGVTSRDEKVF 311

Query: 457 RFANERKIPLVMLTSGGYMKSSARVIADSIINLSKKSLIE 338
           RFA E+KIPL+MLTSGGYMKSSA+VIADSI+NLS+K LI+
Sbjct: 312 RFAREKKIPLIMLTSGGYMKSSAKVIADSIVNLSRKCLID 351


>gb|AAM34784.1|AF510671_1 HDA2 [Arabidopsis thaliana]
          Length = 340

 Score =  164 bits (416), Expect = 1e-38
 Identities = 81/100 (81%), Positives = 91/100 (91%)
 Frame = -2

Query: 637 TGTSTSDYLSKLDEALEVASRNFDPELIVYNAGTDILDGDPLGRLKISPDGIATRDEKVF 458
           +GT+T +YL KLDEALEVASRNF PEL++YNAGTDILDGDPLG LKISPDGI +RDEKVF
Sbjct: 237 SGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVF 296

Query: 457 RFANERKIPLVMLTSGGYMKSSARVIADSIINLSKKSLIE 338
           RFA E+ IPLVMLTSGGYMKSSARVIADSI NLS++ LI+
Sbjct: 297 RFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQ 336


>gb|AAD40129.1|AF149413_10 contains similarity to histone deacetylases; Pfam PF00850,
           Score=13.3, E=5e-10, N=1 [Arabidopsis thaliana]
          Length = 316

 Score =  164 bits (416), Expect = 1e-38
 Identities = 81/100 (81%), Positives = 91/100 (91%)
 Frame = -2

Query: 637 TGTSTSDYLSKLDEALEVASRNFDPELIVYNAGTDILDGDPLGRLKISPDGIATRDEKVF 458
           +GT+T +YL KLDEALEVASRNF PEL++YNAGTDILDGDPLG LKISPDGI +RDEKVF
Sbjct: 213 SGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVF 272

Query: 457 RFANERKIPLVMLTSGGYMKSSARVIADSIINLSKKSLIE 338
           RFA E+ IPLVMLTSGGYMKSSARVIADSI NLS++ LI+
Sbjct: 273 RFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQ 312


>ref|NP_568480.2| histone deacetylase 2 [Arabidopsis thaliana]
           gi|145558941|sp|Q944K3.2|HDA2_ARATH RecName:
           Full=Histone deacetylase 2 gi|332006134|gb|AED93517.1|
           histone deacetylase 2 [Arabidopsis thaliana]
          Length = 387

 Score =  164 bits (416), Expect = 1e-38
 Identities = 81/100 (81%), Positives = 91/100 (91%)
 Frame = -2

Query: 637 TGTSTSDYLSKLDEALEVASRNFDPELIVYNAGTDILDGDPLGRLKISPDGIATRDEKVF 458
           +GT+T +YL KLDEALEVASRNF PEL++YNAGTDILDGDPLG LKISPDGI +RDEKVF
Sbjct: 284 SGTTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVF 343

Query: 457 RFANERKIPLVMLTSGGYMKSSARVIADSIINLSKKSLIE 338
           RFA E+ IPLVMLTSGGYMKSSARVIADSI NLS++ LI+
Sbjct: 344 RFAREKNIPLVMLTSGGYMKSSARVIADSIENLSRQGLIQ 383


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