BLASTX nr result

ID: Cephaelis21_contig00030764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030764
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
emb|CBI40590.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...    68   7e-10

>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 512

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/75 (56%), Positives = 50/75 (66%)
 Frame = +2

Query: 80  MNQFRLKQIHAFTLRNGTDFSSFLITKLLETTDLPYARRVFDNTPDPNVCVYNKLIQA*S 259
           MNQ  LKQIHA++LRNG D + FLI KLL+  DLPYA  +FD  P P+V +YNK IQ  S
Sbjct: 1   MNQ--LKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFS 58

Query: 260 S*GSPLQSLFLSVQM 304
           S G P +   L  QM
Sbjct: 59  SIGHPHRCWLLYCQM 73


>ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 589

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/75 (56%), Positives = 50/75 (66%)
 Frame = +2

Query: 80  MNQFRLKQIHAFTLRNGTDFSSFLITKLLETTDLPYARRVFDNTPDPNVCVYNKLIQA*S 259
           MNQ  LKQIHA++LRNG D + FLI KLL+  DLPYA  +FD  P P+V +YNK IQ  S
Sbjct: 1   MNQ--LKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFS 58

Query: 260 S*GSPLQSLFLSVQM 304
           S G P +   L  QM
Sbjct: 59  SIGHPHRCWLLYCQM 73


>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = +2

Query: 92  RLKQIHAFTLRNGTDFSSFLITKLLETTDLPYARRVFDNTPDPNVCVYNKLIQA*SS*GS 271
           RLKQI A+TLRNG + +  LI  LL+   +PYA ++FD  P P V +YNKLIQA SS G 
Sbjct: 3   RLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGP 62

Query: 272 PLQSLFLSVQMRLK 313
             Q   L  QM L+
Sbjct: 63  HHQCFSLYTQMCLQ 76


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/74 (51%), Positives = 47/74 (63%)
 Frame = +2

Query: 92  RLKQIHAFTLRNGTDFSSFLITKLLETTDLPYARRVFDNTPDPNVCVYNKLIQA*SS*GS 271
           RLKQI A+TLRNG + +  LI  LL+   +PYA ++FD  P P V +YNKLIQA SS G 
Sbjct: 3   RLKQIQAYTLRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGP 62

Query: 272 PLQSLFLSVQMRLK 313
             Q   L  QM L+
Sbjct: 63  HHQCFSLYTQMCLQ 76


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = +2

Query: 80  MNQFRLKQIHAFTLRNGTDFSSFLITKLLETTDLPYARRVFDNTPDPNVCVYNKLIQA*S 259
           MNQ  LKQIHA+TLRNG D++  L  +L++  ++PYA ++ D  P PNV +YNKLIQA S
Sbjct: 1   MNQ--LKQIHAYTLRNGIDYNKTLTERLIQIPNVPYAHKLIDLIPSPNVFLYNKLIQAYS 58

Query: 260 S*GSPLQSLFLSVQMR 307
                 Q   +  QMR
Sbjct: 59  FQNQLHQCFSIYSQMR 74


Top