BLASTX nr result

ID: Cephaelis21_contig00030749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030749
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s...   217   3e-54
emb|CBI33284.3| unnamed protein product [Vitis vinifera]              215   1e-53
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s...   215   1e-53
ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III s...   215   1e-53
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s...   209   9e-52

>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  217 bits (553), Expect = 3e-54
 Identities = 102/161 (63%), Positives = 124/161 (77%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2   NIQNKGRKHYMAAEFEPSKEVTGGAWYVEGKLDKELIDVLKGLCLKIIGSRKVATVEGIY 181
           NIQ+KGRKHYMA EFEPSKE+TGGAWYVEG LD E I +LK  C+K++   KVAT EGI 
Sbjct: 76  NIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKLKVATAEGIS 135

Query: 182 DFLKKQKVTTFECTEQQIGEILNSMLLDNEIIEVKSTGWGEYHSFPVGTPCYRLGSGAGL 361
           + + K  +   EC+ QQI EIL +++LDNEI+EV+S+G GE+ S P+G  CYR  +  GL
Sbjct: 136 ESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGL 195

Query: 362 -GKGVKIGAMASIPCGMCPRISQCTPDGIISPTTCVYYKKW 481
            G G KIGAMASIPCG+CPRI+QCTPDGIISP +C YY KW
Sbjct: 196 GGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKW 236


>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  215 bits (548), Expect = 1e-53
 Identities = 101/161 (62%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2   NIQNKGRKHYMAAEFEPSKEVTGGAWYVEGKLDKELIDVLKGLCLKIIGSRKVATVEGIY 181
           NIQ+KGRKHYMA EFEPSKE+TGGAWYVEG LD E I +LK  C++++   KVAT EGI 
Sbjct: 137 NIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGIS 196

Query: 182 DFLKKQKVTTFECTEQQIGEILNSMLLDNEIIEVKSTGWGEYHSFPVGTPCYRLGSGAGL 361
           + + K  +   EC+ QQI EIL +++LDNEI+EV+S+G GE+ S P+G  CYR  +  GL
Sbjct: 197 ESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGL 256

Query: 362 -GKGVKIGAMASIPCGMCPRISQCTPDGIISPTTCVYYKKW 481
            G G  IGAMASIPCG+CPRI+QCTPDGIISP TC YY KW
Sbjct: 257 GGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 297


>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  215 bits (548), Expect = 1e-53
 Identities = 101/161 (62%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2   NIQNKGRKHYMAAEFEPSKEVTGGAWYVEGKLDKELIDVLKGLCLKIIGSRKVATVEGIY 181
           NIQ+KGRKHYMA EFEPSKE+TGGAWYVEG LD E I +LK  C++++   KVAT EGI 
Sbjct: 76  NIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLKVATAEGIS 135

Query: 182 DFLKKQKVTTFECTEQQIGEILNSMLLDNEIIEVKSTGWGEYHSFPVGTPCYRLGSGAGL 361
           + + K  +   EC+ QQI EIL +++LDNEI+EV+S+G GE+ S P+G  CYR  +  GL
Sbjct: 136 ESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGL 195

Query: 362 -GKGVKIGAMASIPCGMCPRISQCTPDGIISPTTCVYYKKW 481
            G G  IGAMASIPCG+CPRI+QCTPDGIISP TC YY KW
Sbjct: 196 GGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 236


>ref|XP_003635557.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
           vinifera]
          Length = 239

 Score =  215 bits (548), Expect = 1e-53
 Identities = 101/161 (62%), Positives = 123/161 (76%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2   NIQNKGRKHYMAAEFEPSKEVTGGAWYVEGKLDKELIDVLKGLCLKIIGSRKVATVEGIY 181
           NIQ+KGRKHYMA EFEPSKE+TGGAWYVEG LD E I +LK  C++++   KVAT EGI 
Sbjct: 76  NIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGIS 135

Query: 182 DFLKKQKVTTFECTEQQIGEILNSMLLDNEIIEVKSTGWGEYHSFPVGTPCYRLGSGAGL 361
           + + K  +   EC+ QQI EIL +++LDNEI+EV+S+G GE+ S P+G  CYR  +  GL
Sbjct: 136 ESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGL 195

Query: 362 -GKGVKIGAMASIPCGMCPRISQCTPDGIISPTTCVYYKKW 481
            G G  IGAMASIPCG+CPRI+QCTPDGIISP TC YY KW
Sbjct: 196 GGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKW 236


>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
           [Glycine max]
          Length = 239

 Score =  209 bits (532), Expect = 9e-52
 Identities = 99/160 (61%), Positives = 124/160 (77%)
 Frame = +2

Query: 2   NIQNKGRKHYMAAEFEPSKEVTGGAWYVEGKLDKELIDVLKGLCLKIIGSRKVATVEGIY 181
           NIQNKGRKHYMAAEFEPSKE+TGG WY +G+LD + I+++K +CLK I  +KVAT +G+ 
Sbjct: 77  NIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDGVM 136

Query: 182 DFLKKQKVTTFECTEQQIGEILNSMLLDNEIIEVKSTGWGEYHSFPVGTPCYRLGSGAGL 361
           ++ +K  V   E T QQI EIL +++LD+EI+EVKSTG+G++ S PVG  CYR  S  G 
Sbjct: 137 EWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRCKSKGGN 196

Query: 362 GKGVKIGAMASIPCGMCPRISQCTPDGIISPTTCVYYKKW 481
               K GAMASIPCG+CPRI+ CTPDGIISP TCVYY+KW
Sbjct: 197 RGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKW 236


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