BLASTX nr result

ID: Cephaelis21_contig00030440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030440
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         104   8e-21
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]   100   2e-19
emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera]   100   2e-19
gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]           99   5e-19
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]    96   2e-18

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/100 (53%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
 Frame = +2

Query: 2   HIPKD*RSKLDGKSKQCIFLGYGHEEFGYRL*DPVDKKLIRSRDVIFLEDQTIEDLDKSQ 181
           H+P+D RSKLD K++QCIF+GYG +EFGYRL DPV+KKL+RSRDV+F E+QTIED+DK +
Sbjct: 653 HVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVK 712

Query: 182 KPKS-PVEIPVNLDPVPPRPVDIGDGGAEAEQDDNIDDDH 298
           +P+S      V+++PV  R  D  D   E  Q+ +   D+
Sbjct: 713 QPESRDSGSLVDIEPVSRRYTDDVDEVQENVQNGDPVPDY 752


>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
          Length = 761

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/96 (54%), Positives = 64/96 (66%)
 Frame = +2

Query: 2   HIPKD*RSKLDGKSKQCIFLGYGHEEFGYRL*DPVDKKLIRSRDVIFLEDQTIEDLDKSQ 181
           H+P+D  SKLD K+K CIFLGY +EEFGYRL D   KK+IRSRDV+  EDQTIEDLD  +
Sbjct: 450 HVPRDKXSKLDSKTKSCIFLGYSNEEFGYRLWDLATKKIIRSRDVVIFEDQTIEDLDWVK 509

Query: 182 KPKSPVEIPVNLDPVPPRPVDIGDGGAEAEQDDNID 289
           KPK   E   +L PV P  +   D   E  Q++ +D
Sbjct: 510 KPKPFSEEQXDLGPVSPNSMG-HDEHREVVQEEQVD 544


>emb|CAN69994.1| hypothetical protein VITISV_018606 [Vitis vinifera]
          Length = 626

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/96 (53%), Positives = 66/96 (68%)
 Frame = +2

Query: 2   HIPKD*RSKLDGKSKQCIFLGYGHEEFGYRL*DPVDKKLIRSRDVIFLEDQTIEDLDKSQ 181
           H+ +D RSKLD  +KQCIFLGY +EEFGYRL DP  K++I+SRDVIF EDQTI  LD+ +
Sbjct: 171 HVLRDERSKLDSNTKQCIFLGYSNEEFGYRLWDPTTKQIIKSRDVIFFEDQTIAKLDRVK 230

Query: 182 KPKSPVEIPVNLDPVPPRPVDIGDGGAEAEQDDNID 289
           KPK   E  V+L PV P  +   +   E  Q++ +D
Sbjct: 231 KPKPFSEEQVDLGPVSPNSMGHNE-HREVVQEEQVD 265


>gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]
          Length = 521

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 27/97 (27%)
 Frame = +2

Query: 2   HIPKD*RSKLDGKSKQCIFLGYGHEEFGYRL*DPVDKKLIRSRDVIFLEDQ--------- 154
           HIPKD RSKLD K+K CIFLGYGHEEFGYRL DPV+KK+IRSRDV+FLEDQ         
Sbjct: 384 HIPKDERSKLDNKAKACIFLGYGHEEFGYRLWDPVNKKIIRSRDVVFLEDQLFDDVYDDH 443

Query: 155 -----------------TIEDLDKS-QKPKSPVEIPV 211
                            T++D++ + Q P SPVEIP+
Sbjct: 444 GGDEQEDHGENVSDDTPTVDDIEPTEQAPPSPVEIPL 480


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 51/112 (45%), Positives = 69/112 (61%), Gaps = 14/112 (12%)
 Frame = +2

Query: 2   HIPKD*RSKLDGKSKQCIFLGYGHEEFGYRL*DPVDKKLIRSRDVIFLEDQTIEDLDKSQ 181
           HIPKD RSKLD K++ C+F+GYG +E GYR  DPV KKL+RSRDV+F+ED TI+D++K+ 
Sbjct: 538 HIPKDERSKLDAKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTN 597

Query: 182 KPKSPVEIP-VNLDPVP----PRPV---------DIGDGGAEAEQDDNIDDD 295
             +S      ++LDP P    P  V         D+GD     + +D   DD
Sbjct: 598 PMESQHSGDLIDLDPAPLTNLPTQVEDEAHDDQHDMGDVETPTQVEDEAHDD 649


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