BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030426
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_002870994.1| pentatricopeptide repeat-containing protein ...    57   1e-06
ref|NP_195906.1| pentatricopeptide repeat-containing protein [Ar...    56   3e-06

>ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +1

Query: 325 IPRSRRRIGKHRDSNKGKPWSHHRLSPQGDLALQTRIDPQF 447
           IPR RRRIGK +D+N+GKPWSH RLSP G   LQT IDP F
Sbjct: 59  IPRRRRRIGKSQDANRGKPWSHGRLSPPGQRILQTLIDPTF 99


>ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +1

Query: 199 SPHHHHPSSNFV-LLQNLFNQQTQHNPATCSTSNQAGCDHQSFIPRSRRRIGKHRDSNKG 375
           +PH    SS    LLQ+L   Q        S+S Q      +F  R+R RIG+  D N+G
Sbjct: 44  TPHLSSASSPLAPLLQDLLPHQHP------SSSTQPHLPKPTF--RTRTRIGRSHDPNRG 95

Query: 376 KPWSHHRLSPQGDLALQTRIDPQFE 450
           KPWSHHRLS QG   L + ++P+F+
Sbjct: 96  KPWSHHRLSTQGQRILDSLLNPEFD 120


>ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +1

Query: 199 SPHHHHPSSNFV-LLQNLFNQQTQHNPATCSTSNQAGCDHQSFIPRSRRRIGKHRDSNKG 375
           +PH    SS    LLQ+L   Q        S+S Q      +F  R+R RIG+  D N+G
Sbjct: 44  TPHLSSASSPLAPLLQDLLPHQHP------SSSTQPHLPKPTF--RTRTRIGRSHDPNRG 95

Query: 376 KPWSHHRLSPQGDLALQTRIDPQFE 450
           KPWSHHRLS QG   L + ++P+F+
Sbjct: 96  KPWSHHRLSTQGQRILDSLLNPEFD 120


>ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316831|gb|EFH47253.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 819

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = +1

Query: 235 LLQNLFNQQTQHN--PATCSTSNQAGCDHQSFIPRSRRRIGKHRDSNKGKPWSHHRLSPQ 408
           LL ++F  Q  ++  P T  TS            R+R RIGK RD N GKPWS+H LSPQ
Sbjct: 49  LLHDVFLHQNPNSRQPITSQTSRN----------RNRTRIGKSRDPNLGKPWSYHGLSPQ 98

Query: 409 GDLALQTRIDPQFE 450
           G   L++ I+P F+
Sbjct: 99  GQQVLRSLIEPNFD 112


>ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g02860 gi|7413561|emb|CAB86040.1| putative protein
           [Arabidopsis thaliana] gi|332003145|gb|AED90528.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 819

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +1

Query: 331 RSRRRIGKHRDSNKGKPWSHHRLSPQGDLALQTRIDPQFE 450
           R+R RIGK RD N GKPWS+H LSPQG   L++ I+P F+
Sbjct: 73  RNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFD 112