BLASTX nr result

ID: Cephaelis21_contig00030285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030285
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16
emb|CBI27249.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ...    82   5e-14
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14

>ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|222865142|gb|EEF02273.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/71 (60%), Positives = 55/71 (77%)
 Frame = -2

Query: 348 EVAVRKMLELHPHDACYYVLMANLYASDGRWNQAYHMRDLMRTKGLRKSPGFSNLNMDFD 169
           E+A+++MLELHP DACYYVLM NLYASD RW++   +R+LM+ +GL K+PG S + MD D
Sbjct: 594 ELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMDVD 653

Query: 168 SDFHSIRAASL 136
            DF   RAASL
Sbjct: 654 HDFSFSRAASL 664


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/72 (56%), Positives = 56/72 (77%)
 Frame = -2

Query: 348 EVAVRKMLELHPHDACYYVLMANLYASDGRWNQAYHMRDLMRTKGLRKSPGFSNLNMDFD 169
           EVAVR+MLELHP  ACYYVLM+NLYAS+GRW+QA  + +LM+ +GL K PG+S ++++  
Sbjct: 629 EVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETS 688

Query: 168 SDFHSIRAASLP 133
           +DF  +  AS P
Sbjct: 689 NDFSPLIVASHP 700


>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/63 (60%), Positives = 52/63 (82%)
 Frame = -2

Query: 348 EVAVRKMLELHPHDACYYVLMANLYASDGRWNQAYHMRDLMRTKGLRKSPGFSNLNMDFD 169
           EVAVR+MLELHP  ACYYVLM+NLYAS+GRW+QA  + +LM+ +GL K PG+S ++++  
Sbjct: 630 EVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETS 689

Query: 168 SDF 160
           +DF
Sbjct: 690 NDF 692


>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508818|gb|AES89960.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 871

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 35/64 (54%), Positives = 48/64 (75%)
 Frame = -2

Query: 348 EVAVRKMLELHPHDACYYVLMANLYASDGRWNQAYHMRDLMRTKGLRKSPGFSNLNMDFD 169
           EVA+R+MLELHP  ACYYVL++NLYASDGRW     +R++++ +GL K PG S + MD +
Sbjct: 632 EVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVN 691

Query: 168 SDFH 157
           +  H
Sbjct: 692 NTTH 695


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/63 (52%), Positives = 49/63 (77%)
 Frame = -2

Query: 342 AVRKMLELHPHDACYYVLMANLYASDGRWNQAYHMRDLMRTKGLRKSPGFSNLNMDFDSD 163
           A++KMLELHP +ACYYVL++NLYASDGRW     +R++++ +GL K PG S++ MD  +D
Sbjct: 631 AIKKMLELHPDEACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSSVEMDLQND 690

Query: 162 FHS 154
            ++
Sbjct: 691 SYA 693


Top