BLASTX nr result

ID: Cephaelis21_contig00030243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030243
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu...   159   8e-37
ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|2...   152   9e-35
ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis ...   147   4e-33
ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
emb|CBI27295.3| unnamed protein product [Vitis vinifera]              141   3e-31

>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
           gi|223549250|gb|EEF50739.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 355

 Score =  159 bits (403), Expect = 8e-37
 Identities = 91/156 (58%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
 Frame = -3

Query: 530 MGDSDKSKMISRSE---MESFSLDASKFSRDLLNRFMGSGTXXXXXXXXXXXXXXXXXXE 360
           MG  D+ +  S S    MES SL+ +K+ RDLL RFM + +                   
Sbjct: 1   MGKEDEKRNRSSSSSRTMESLSLEINKYPRDLLQRFMSNDSQQLKTSEGEEDNTEEIE-- 58

Query: 359 LNLGLSLGGRFGVDKTSKKLMRSSSVAAYLPVVRDDDAVAASTSPPVVSYPSLVRTSSLP 180
           LNLGLSLGGRFGVDKTSKKL RSSS+A  +P+VRD DA     + P VSYP L+RTSSLP
Sbjct: 59  LNLGLSLGGRFGVDKTSKKLTRSSSIAGSIPLVRDHDAF---NTQPAVSYPLLIRTSSLP 115

Query: 179 VETEEEWRKRKELQTLRRMEAKRRRSEKQRNLKADR 72
            ETEEEWRKRKE+QTLRRMEAKRRRSEKQ+NL  +R
Sbjct: 116 TETEEEWRKRKEMQTLRRMEAKRRRSEKQKNLNLNR 151


>ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|222852105|gb|EEE89652.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  152 bits (385), Expect = 9e-35
 Identities = 85/138 (61%), Positives = 100/138 (72%)
 Frame = -3

Query: 488 MESFSLDASKFSRDLLNRFMGSGTXXXXXXXXXXXXXXXXXXELNLGLSLGGRFGVDKTS 309
           MES SLD +++ RDLL RFM S                     LNLGLSLGGRFGVDK+S
Sbjct: 1   MESLSLDINRYPRDLLQRFMSSDAQQYQTATSDGEETEEIE--LNLGLSLGGRFGVDKSS 58

Query: 308 KKLMRSSSVAAYLPVVRDDDAVAASTSPPVVSYPSLVRTSSLPVETEEEWRKRKELQTLR 129
           KKL RSSS+A  +P++RD DA+   T+PP  SYP L+RTSSLP ETEEEWRKRKE+Q+LR
Sbjct: 59  KKLTRSSSIAGSIPLLRDYDAL---TTPPA-SYPLLMRTSSLPTETEEEWRKRKEMQSLR 114

Query: 128 RMEAKRRRSEKQRNLKAD 75
           RMEAKRRRSEKQRNL+ +
Sbjct: 115 RMEAKRRRSEKQRNLRGE 132


>ref|XP_002274025.1| PREDICTED: ninja-family protein AFP1 [Vitis vinifera]
          Length = 360

 Score =  147 bits (371), Expect = 4e-33
 Identities = 82/134 (61%), Positives = 91/134 (67%)
 Frame = -3

Query: 488 MESFSLDASKFSRDLLNRFMGSGTXXXXXXXXXXXXXXXXXXELNLGLSLGGRFGVDKTS 309
           ME F L   K  RDLL R MG+                    ELNLGLSLGGRFGVDK+ 
Sbjct: 1   MEHFGLRMEKNPRDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSE 60

Query: 308 KKLMRSSSVAAYLPVVRDDDAVAASTSPPVVSYPSLVRTSSLPVETEEEWRKRKELQTLR 129
           KKLMRSSS+A  + + RD+DA+      P VSY SL+RTSSLP ET+EEWRKRKELQTLR
Sbjct: 61  KKLMRSSSIAGSIGITRDEDALVT----PAVSYSSLMRTSSLPTETQEEWRKRKELQTLR 116

Query: 128 RMEAKRRRSEKQRN 87
           RMEAKRRRSEKQRN
Sbjct: 117 RMEAKRRRSEKQRN 130


>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  145 bits (367), Expect = 1e-32
 Identities = 80/138 (57%), Positives = 97/138 (70%)
 Frame = -3

Query: 488 MESFSLDASKFSRDLLNRFMGSGTXXXXXXXXXXXXXXXXXXELNLGLSLGGRFGVDKTS 309
           MES SL+ +++ RDL+ R + S                     LNLGLSLGGRFGVDKTS
Sbjct: 1   MESLSLEINRYPRDLVQRLISSDAQQYKTATSEGEEAEEIE--LNLGLSLGGRFGVDKTS 58

Query: 308 KKLMRSSSVAAYLPVVRDDDAVAASTSPPVVSYPSLVRTSSLPVETEEEWRKRKELQTLR 129
           +KL RSSS+A  +P++RD DA+    S P VSYP L+RTSSLP ETEEEWRKRKE Q+LR
Sbjct: 59  EKLTRSSSIAGSIPLLRDHDAL----STPPVSYPFLIRTSSLPTETEEEWRKRKENQSLR 114

Query: 128 RMEAKRRRSEKQRNLKAD 75
           RMEAKRRRSEKQ+NL+ +
Sbjct: 115 RMEAKRRRSEKQKNLRGE 132


>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  141 bits (355), Expect = 3e-31
 Identities = 78/125 (62%), Positives = 87/125 (69%)
 Frame = -3

Query: 461 KFSRDLLNRFMGSGTXXXXXXXXXXXXXXXXXXELNLGLSLGGRFGVDKTSKKLMRSSSV 282
           K  RDLL R MG+                    ELNLGLSLGGRFGVDK+ KKLMRSSS+
Sbjct: 3   KNPRDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEKKLMRSSSI 62

Query: 281 AAYLPVVRDDDAVAASTSPPVVSYPSLVRTSSLPVETEEEWRKRKELQTLRRMEAKRRRS 102
           A  + + RD+DA+      P VSY SL+RTSSLP ET+EEWRKRKELQTLRRMEAKRRRS
Sbjct: 63  AGSIGITRDEDALVT----PAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRRS 118

Query: 101 EKQRN 87
           EKQRN
Sbjct: 119 EKQRN 123


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