BLASTX nr result

ID: Cephaelis21_contig00030220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030220
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]             103   1e-20
emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]             103   1e-20
emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]             100   1e-19
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   3e-18
ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group] g...    96   3e-18

>emb|CAD45561.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/103 (49%), Positives = 71/103 (68%)
 Frame = -2

Query: 374 SQSAFVPGWDIGDNVLIAQELVQQLDWRAHGHNLVFKFDMLEAFDRVSWGFLWQHLLKFG 195
           +Q AFV G +I +N+ +AQEL Q+ + + +GHN++ K DM +A+DR+ W FL+Q LL+FG
Sbjct: 35  NQGAFVKGRNILENISLAQELTQEFNRKCYGHNVIIKLDMGKAYDRLEWDFLFQVLLRFG 94

Query: 194 FHW*MVNLVLGNLSANWFSVLINGVSVGFFHSSRGLK*WDPLS 66
           FH   VN +    +  WFSVL NG   GFF S+RGL+  DPLS
Sbjct: 95  FHPGWVNYIRAMFTNCWFSVLYNGGVHGFFKSTRGLRQGDPLS 137


>emb|CAD45564.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -2

Query: 374 SQSAFVPGWDIGDNVLIAQELVQQLDWRAHGHNLVFKFDMLEAFDRVSWGFLWQHLLKFG 195
           +Q AFV G +I +N+ +AQEL Q+ + + +GHN++ K DM EA+DR+ W FL+Q LL+FG
Sbjct: 35  NQGAFVKGRNILENISLAQELTQEFNRKCYGHNVIIKPDMGEAYDRLEWDFLFQVLLRFG 94

Query: 194 FHW*MVNLVLGNLSANWFSVLINGVSVGFFHSSRGLK*WDPLS 66
           FH   VN +    +  WFSVL NG   GFF S+RGL+  DPLS
Sbjct: 95  FHPGWVNYIRAMFTNCWFSVLYNGGVHGFFKSTRGLRQGDPLS 137


>emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/103 (48%), Positives = 70/103 (67%)
 Frame = -2

Query: 374 SQSAFVPGWDIGDNVLIAQELVQQLDWRAHGHNLVFKFDMLEAFDRVSWGFLWQHLLKFG 195
           +Q AFV G +I +N+ +AQEL Q+ + + +GHN++ K DM +A+D + W FL+Q LL+FG
Sbjct: 35  NQGAFVKGRNILENISLAQELTQEFNRKCYGHNVIIKLDMGKAYDWLEWDFLFQVLLRFG 94

Query: 194 FHW*MVNLVLGNLSANWFSVLINGVSVGFFHSSRGLK*WDPLS 66
           FH   VN +    +  WFSVL NG   GFF S+RGL+  DPLS
Sbjct: 95  FHPGWVNYIRAMFTNCWFSVLYNGGVHGFFKSTRGLRQGDPLS 137


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 54/120 (45%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
 Frame = -2

Query: 374 SQSAFVPGWDIGDNVLIAQELVQQLDWRAHGHN--LVFKFDMLEAFDRVSWGFLWQHLLK 201
           +QSAFVPG  I DN LIA E+   +  R       +  K DM +A+DRV WGFL + LL 
Sbjct: 540 NQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLT 599

Query: 200 FGFHW*MVNLVLGNLSANWFSVLINGVSVGFFHSSRGLK*WDPLSPYLFILVTEALSRAL 21
            GF    VNL++  +S+  +S +ING   G    +RGL+  DPLSPYLFIL+ +A S+ +
Sbjct: 600 MGFDGRWVNLIMSCVSSVSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIADAFSKMI 659


>ref|NP_001057661.2| Os06g0484800 [Oryza sativa Japonica Group]
           gi|125597263|gb|EAZ37043.1| hypothetical protein
           OsJ_21387 [Oryza sativa Japonica Group]
           gi|255677053|dbj|BAF19575.2| Os06g0484800 [Oryza sativa
           Japonica Group]
          Length = 935

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/120 (41%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
 Frame = -2

Query: 374 SQSAFVPGWDIGDNVLIAQELVQQLDWRAHGHN-LVFKFDMLEAFDRVSWGFLWQHLLKF 198
           SQ AF+PG  I +N++IAQE+V      ++ H+  + K D+ +AFDR+ W F+   L + 
Sbjct: 357 SQHAFIPGRRIANNIIIAQEIVHSFGLNSYPHHAFLIKIDLSKAFDRLEWDFIANALQRK 416

Query: 197 GFHW*MVNLVLGNLSANWFSVLINGVSVGFFHSSRGLK*WDPLSPYLFILVTEALSRALD 18
           GFH   +NLVL  ++++ FSV ING + G F+++RG++   PLSPYLF      LS  L+
Sbjct: 417 GFHHHFINLVLSCINSSSFSVNINGQTYGAFNANRGIRQGCPLSPYLFCFALNELSDQLN 476


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