BLASTX nr result

ID: Cephaelis21_contig00030100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030100
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195702.1| C-CAP/cofactor C-like domain-containing protein...   124   6e-27
gb|AAM22959.1|AF486850_1 tubulin folding cofactor C [Arabidopsis...   124   6e-27
ref|XP_002866894.1| hypothetical protein ARALYDRAFT_912482 [Arab...   123   1e-26
ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like...   118   4e-25
ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinu...   117   1e-24

>ref|NP_195702.1| C-CAP/cofactor C-like domain-containing protein [Arabidopsis
           thaliana] gi|75206810|sp|Q9SMR2.1|TBCC_ARATH RecName:
           Full=Tubulin-folding cofactor C; Short=TFC C; AltName:
           Full=Protein PORCINO gi|4490743|emb|CAB38905.1| putative
           protein [Arabidopsis thaliana]
           gi|7271047|emb|CAB80655.1| putative protein [Arabidopsis
           thaliana] gi|89000967|gb|ABD59073.1| At4g39920
           [Arabidopsis thaliana] gi|332661738|gb|AEE87138.1|
           C-CAP/cofactor C-like domain-containing protein
           [Arabidopsis thaliana]
          Length = 345

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/132 (50%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 QSQDEALHRKHAAMVERLSSLHQARLAQKPNSELSTPST-ESTQSFLTRFNESKVSVESN 219
           ++ D AL +KH  M+ERLS+ HQAR +  P+S  S+ ST EST SFL +F++SK S+ES 
Sbjct: 11  ETLDPALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSFLAKFSDSKRSIESR 70

Query: 218 LSHISQTNPIDNSSDRSSLKSELDNVAVSISGIEKLVAESSYFLPSYEVRTCLKTVSDLK 39
              I+++    +S+D S LKS+L  ++V+I  +EKL+AE+SYFLPSYEVR+ LK VSDLK
Sbjct: 71  ---IAESRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEVRSSLKIVSDLK 127

Query: 38  QYLDDVTSQVIP 3
           Q LD ++ +++P
Sbjct: 128 QSLDILSGELVP 139


>gb|AAM22959.1|AF486850_1 tubulin folding cofactor C [Arabidopsis thaliana]
          Length = 340

 Score =  124 bits (312), Expect = 6e-27
 Identities = 67/132 (50%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = -2

Query: 395 QSQDEALHRKHAAMVERLSSLHQARLAQKPNSELSTPST-ESTQSFLTRFNESKVSVESN 219
           ++ D AL +KH  M+ERLS+ HQAR +  P+S  S+ ST EST SFL +F++SK S+ES 
Sbjct: 11  ETLDPALQKKHHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSFLAKFSDSKRSIESR 70

Query: 218 LSHISQTNPIDNSSDRSSLKSELDNVAVSISGIEKLVAESSYFLPSYEVRTCLKTVSDLK 39
              I+++    +S+D S LKS+L  ++V+I  +EKL+AE+SYFLPSYEVR+ LK VSDLK
Sbjct: 71  ---IAESRLASSSTDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEVRSSLKIVSDLK 127

Query: 38  QYLDDVTSQVIP 3
           Q LD ++ +++P
Sbjct: 128 QSLDILSGELVP 139


>ref|XP_002866894.1| hypothetical protein ARALYDRAFT_912482 [Arabidopsis lyrata subsp.
           lyrata] gi|297312730|gb|EFH43153.1| hypothetical protein
           ARALYDRAFT_912482 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/133 (48%), Positives = 99/133 (74%), Gaps = 2/133 (1%)
 Frame = -2

Query: 395 QSQDEALHRKHAAMVERLSSLHQARLAQKPNSELSTPST--ESTQSFLTRFNESKVSVES 222
           ++ D AL +KH  M+ERLS+ HQAR +  P++  S+ S+  EST SFL +F++SK S+ES
Sbjct: 11  ETLDPALQKKHHDMLERLSARHQARKSDSPDASSSSSSSTLESTSSFLAKFSDSKRSIES 70

Query: 221 NLSHISQTNPIDNSSDRSSLKSELDNVAVSISGIEKLVAESSYFLPSYEVRTCLKTVSDL 42
               I+++  + +S+D S LKS+L  ++V+I+ +EKL+AE+SYFLPSYEVR+ LK VSDL
Sbjct: 71  R---IAESRLVSSSTDSSKLKSDLAEISVAINNLEKLLAENSYFLPSYEVRSSLKIVSDL 127

Query: 41  KQYLDDVTSQVIP 3
           KQ LD ++ +++P
Sbjct: 128 KQSLDILSGELVP 140


>ref|XP_002269385.1| PREDICTED: tubulin-specific chaperone C-like [Vitis vinifera]
          Length = 351

 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/134 (48%), Positives = 93/134 (69%), Gaps = 3/134 (2%)
 Frame = -2

Query: 395 QSQDEALHRKHAAMVERLSSLHQARLAQ---KPNSELSTPSTESTQSFLTRFNESKVSVE 225
           Q+ D A  +KHA+M+ RLS+L Q RL Q   + +  +S PS ESTQSFLTRF++SK S+E
Sbjct: 12  QALDSATQKKHASMLARLSNLQQTRLQQSLARKSDSVSGPSFESTQSFLTRFSDSKRSIE 71

Query: 224 SNLSHISQTNPIDNSSDRSSLKSELDNVAVSISGIEKLVAESSYFLPSYEVRTCLKTVSD 45
           S L+    T+     SD       L  ++ SI+ +EKLVAE+SY+LPSYE+R+ LK+VS+
Sbjct: 72  SQLAGARLTSDPQRRSD-------LQQISTSIADLEKLVAENSYYLPSYEIRSALKSVSE 124

Query: 44  LKQYLDDVTSQVIP 3
           LKQ LD++ S+++P
Sbjct: 125 LKQTLDNLNSELLP 138


>ref|XP_002532835.1| tubulin folding cofactor C, putative [Ricinus communis]
           gi|223527402|gb|EEF29542.1| tubulin folding cofactor C,
           putative [Ricinus communis]
          Length = 351

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/128 (48%), Positives = 91/128 (71%)
 Frame = -2

Query: 386 DEALHRKHAAMVERLSSLHQARLAQKPNSELSTPSTESTQSFLTRFNESKVSVESNLSHI 207
           D AL++KH AM++RLS+ HQ R+    N   +  +T +T SFL++F ++K S+ES LSH 
Sbjct: 22  DSALNKKHQAMLDRLSNRHQNRI----NKSTTATATAATASFLSKFTDAKQSIESQLSHS 77

Query: 206 SQTNPIDNSSDRSSLKSELDNVAVSISGIEKLVAESSYFLPSYEVRTCLKTVSDLKQYLD 27
           S       ++D + LKS L N++ SIS +E+L+AE+SY LPSYE+R+ LKTVSDLKQ LD
Sbjct: 78  STLA----ATDPTLLKSHLVNISASISSLEQLIAENSYLLPSYELRSSLKTVSDLKQSLD 133

Query: 26  DVTSQVIP 3
           ++ S ++P
Sbjct: 134 NLNSDLVP 141


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