BLASTX nr result

ID: Cephaelis21_contig00030078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030078
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81029.1| hypothetical protein VITISV_020535 [Vitis vinifera]    65   8e-09
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...    64   2e-08
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...    64   2e-08
ref|XP_002271672.2| PREDICTED: glutamate receptor 2.8-like [Viti...    63   2e-08
emb|CBI23997.3| unnamed protein product [Vitis vinifera]               63   2e-08

>emb|CAN81029.1| hypothetical protein VITISV_020535 [Vitis vinifera]
          Length = 971

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/75 (48%), Positives = 44/75 (58%)
 Frame = -1

Query: 227 GNLFVYKLNNAFRKVDIQLASMIAISTSAKDGEIMNELRNLMAKQTRVFLVHMNILLGHR 48
           GN  V  L +A  +VD  +    AI  SA D +I+ EL  LM   TRVF+VHM   LG +
Sbjct: 180 GNGVVPSLTSALEEVDTHVTYRSAIHPSATDDQIVKELYKLMTMSTRVFIVHMLTPLGSQ 239

Query: 47  LLVLARKAGMMSEGY 3
           L   A+KAGMM EGY
Sbjct: 240 LFTKAKKAGMMEEGY 254


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 931

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/68 (50%), Positives = 44/68 (64%)
 Frame = -1

Query: 206 LNNAFRKVDIQLASMIAISTSAKDGEIMNELRNLMAKQTRVFLVHMNILLGHRLLVLARK 27
           L +A + +D ++     IS SA D +I  EL  LM+ QTRVF++HM   LG RLL  AR+
Sbjct: 161 LTDALQAIDARIPYRSLISFSATDDQIAEELYKLMSMQTRVFILHMLPSLGSRLLTKARE 220

Query: 26  AGMMSEGY 3
            GMMSEGY
Sbjct: 221 VGMMSEGY 228


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 866

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/68 (50%), Positives = 44/68 (64%)
 Frame = -1

Query: 206 LNNAFRKVDIQLASMIAISTSAKDGEIMNELRNLMAKQTRVFLVHMNILLGHRLLVLARK 27
           L +A ++VD ++     IS SA D +I+ EL  LM  QTRVF+VHM   LG RL   A++
Sbjct: 165 LTDALQEVDARVPYRSVISPSATDDQIVEELYKLMTMQTRVFIVHMYPSLGTRLFTKAKE 224

Query: 26  AGMMSEGY 3
            GMMSEGY
Sbjct: 225 IGMMSEGY 232


>ref|XP_002271672.2| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 1270

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/75 (46%), Positives = 44/75 (58%)
 Frame = -1

Query: 227 GNLFVYKLNNAFRKVDIQLASMIAISTSAKDGEIMNELRNLMAKQTRVFLVHMNILLGHR 48
           GN  V  L +A ++VD  +    AI  SA D +I+ EL  LM   TRVF+VHM   LG +
Sbjct: 153 GNEVVPSLTSALQEVDTHVTYRSAIHPSATDDQIVKELYKLMTMSTRVFIVHMLTPLGSQ 212

Query: 47  LLVLARKAGMMSEGY 3
           L   A +AGMM EGY
Sbjct: 213 LFTKANEAGMMEEGY 227


>emb|CBI23997.3| unnamed protein product [Vitis vinifera]
          Length = 1316

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/75 (46%), Positives = 44/75 (58%)
 Frame = -1

Query: 227 GNLFVYKLNNAFRKVDIQLASMIAISTSAKDGEIMNELRNLMAKQTRVFLVHMNILLGHR 48
           GN  V  L +A ++VD  +    AI  SA D +I+ EL  LM   TRVF+VHM   LG +
Sbjct: 153 GNEVVPSLTSALQEVDTHVTYRSAIHPSATDDQIVKELYKLMTMSTRVFIVHMLTPLGSQ 212

Query: 47  LLVLARKAGMMSEGY 3
           L   A +AGMM EGY
Sbjct: 213 LFTKANEAGMMEEGY 227


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