BLASTX nr result

ID: Cephaelis21_contig00030047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030047
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   1e-12
gb|ABN08841.1| RNA-directed DNA polymerase (Reverse transcriptas...    77   2e-12
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    71   1e-10
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    70   2e-10
gb|EEC81735.1| hypothetical protein OsI_25376 [Oryza sativa Indi...    70   2e-10

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/82 (45%), Positives = 54/82 (65%)
 Frame = +3

Query: 6   VKEILETYEHYSGQQVNMEKSSLFFSKNTPQNLINSICSSLPGVQIQKHSKYLGIPLEIG 185
           V +IL TYE  SGQ++NMEKS + +S+N   + IN++   L    ++ H KYLG+P  IG
Sbjct: 708 VMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIG 767

Query: 186 KCKTQIFQFLKDAVRKKLQSWK 251
             K ++FQ ++D V KKL+ WK
Sbjct: 768 SSKKRVFQAIQDRVWKKLKGWK 789


>gb|ABN08841.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 462

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/83 (42%), Positives = 55/83 (66%)
 Frame = +3

Query: 6   VKEILETYEHYSGQQVNMEKSSLFFSKNTPQNLINSICSSLPGVQIQKHSKYLGIPLEIG 185
           +K IL TYE   GQ +N++KS LF ++NTP++L + I +++   Q+    KYLG+P  IG
Sbjct: 336 MKNILATYEEALGQAINLQKSKLFCTRNTPEDLKSLIAATIGVHQVLGTGKYLGLPSMIG 395

Query: 186 KCKTQIFQFLKDAVRKKLQSWKT 254
           + K   F+F+KD +R K+ SW +
Sbjct: 396 RSKHATFKFIKDRIRNKINSWSS 418


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/83 (42%), Positives = 49/83 (59%)
 Frame = +3

Query: 3   VVKEILETYEHYSGQQVNMEKSSLFFSKNTPQNLINSICSSLPGVQIQKHSKYLGIPLEI 182
           ++ EIL  YE  SGQ++N +KS + FSK         + + L   Q+++H KYLGIP   
Sbjct: 702 IIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSIT 761

Query: 183 GKCKTQIFQFLKDAVRKKLQSWK 251
           G+ +T IF  L D + KKLQ WK
Sbjct: 762 GRSRTAIFDSLMDRIWKKLQGWK 784


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/83 (39%), Positives = 50/83 (60%)
 Frame = +3

Query: 6    VKEILETYEHYSGQQVNMEKSSLFFSKNTPQNLINSICSSLPGVQIQKHSKYLGIPLEIG 185
            +K ILE YE  SGQ +N +KS +F+S+N    +  SI   L   Q+    KYLG+P  +G
Sbjct: 1123 MKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSMVG 1182

Query: 186  KCKTQIFQFLKDAVRKKLQSWKT 254
            + +   F+F+K+ V KK+ SW +
Sbjct: 1183 RSRISTFKFVKERVWKKINSWSS 1205


>gb|EEC81735.1| hypothetical protein OsI_25376 [Oryza sativa Indica Group]
          Length = 235

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/82 (37%), Positives = 52/82 (63%)
 Frame = +3

Query: 6   VKEILETYEHYSGQQVNMEKSSLFFSKNTPQNLINSICSSLPGVQIQKHSKYLGIPLEIG 185
           ++EIL  YE  SGQ +N +KS + FS NT  +  N +  +L   +   + +YLG+P+ +G
Sbjct: 116 LQEILSLYEELSGQMINKDKSVVMFSPNTSNSKRNEVMQALQINRQTMNERYLGLPVYVG 175

Query: 186 KCKTQIFQFLKDAVRKKLQSWK 251
           + K ++F +LKD + K++Q WK
Sbjct: 176 RDKMKVFAYLKDRIWKRIQGWK 197


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