BLASTX nr result

ID: Cephaelis21_contig00030035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030035
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-39
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   160   1e-37
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   155   4e-36
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/114 (67%), Positives = 96/114 (84%)
 Frame = +2

Query: 2   MGLVEGGLRIFKSIKKVYRMEPVVQHYGCLVDLLGRAGMLEQARKVVKEMPMEPDSYVLG 181
           +GLVE GLRIFKS+  +Y +EPVVQHYGCLVDLLGRAGMLE A++VV+EMP+EPDSYVLG
Sbjct: 359 VGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLG 418

Query: 182 ALLDACRIYGDINLGKETVRGLADQSLDDSGARVLLSNIYAAVKNWDHAERVRQ 343
           ALL+ACR++GD+ LGKETV  LA++SLD  G  VLLSN+YA+   W+   +VR+
Sbjct: 419 ALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRK 472


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/114 (67%), Positives = 96/114 (84%)
 Frame = +2

Query: 2   MGLVEGGLRIFKSIKKVYRMEPVVQHYGCLVDLLGRAGMLEQARKVVKEMPMEPDSYVLG 181
           +GLVE GLRIFKS+  +Y +EPVVQHYGCLVDLLGRAGMLE A++VV+EMP+EPDSYVLG
Sbjct: 334 VGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLG 393

Query: 182 ALLDACRIYGDINLGKETVRGLADQSLDDSGARVLLSNIYAAVKNWDHAERVRQ 343
           ALL+ACR++GD+ LGKETV  LA++SLD  G  VLLSN+YA+   W+   +VR+
Sbjct: 394 ALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRK 447


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  160 bits (404), Expect = 1e-37
 Identities = 76/114 (66%), Positives = 93/114 (81%)
 Frame = +2

Query: 2   MGLVEGGLRIFKSIKKVYRMEPVVQHYGCLVDLLGRAGMLEQARKVVKEMPMEPDSYVLG 181
           MGLV+ GLRIF+++ K+Y  EP VQHYGCLVDLLGRAG LE+A+K+VKEMPM+PDSYVLG
Sbjct: 357 MGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLG 416

Query: 182 ALLDACRIYGDINLGKETVRGLADQSLDDSGARVLLSNIYAAVKNWDHAERVRQ 343
           ALL+A R+YGD+ LG+ETV  LA  SLD SG  V+LSN+YA+   WD   RVR+
Sbjct: 417 ALLNASRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRR 470


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/114 (62%), Positives = 92/114 (80%)
 Frame = +2

Query: 2   MGLVEGGLRIFKSIKKVYRMEPVVQHYGCLVDLLGRAGMLEQARKVVKEMPMEPDSYVLG 181
           MGLV+ GLRIF  +  VY +EP VQHYGC+VDLLGRAG+LE+A+++V+EMPMEPDSYVLG
Sbjct: 354 MGLVDEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLG 413

Query: 182 ALLDACRIYGDINLGKETVRGLADQSLDDSGARVLLSNIYAAVKNWDHAERVRQ 343
           ALL++CR++GD+ LGKETV  L ++ LD  G  VLLSN+YA+   WD   +VR+
Sbjct: 414 ALLNSCRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRK 467


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  148 bits (374), Expect = 4e-34
 Identities = 66/114 (57%), Positives = 90/114 (78%)
 Frame = +2

Query: 2   MGLVEGGLRIFKSIKKVYRMEPVVQHYGCLVDLLGRAGMLEQARKVVKEMPMEPDSYVLG 181
           MG+V+ GLRIF+S+   Y +EP +QHYGCLVDLLGRAG +E+A++VV+EMP++PDSY LG
Sbjct: 358 MGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLG 417

Query: 182 ALLDACRIYGDINLGKETVRGLADQSLDDSGARVLLSNIYAAVKNWDHAERVRQ 343
           ALLDACR++GD+ LG+E V  L  + LD  G  VLLSN+YA+   W+ A ++R+
Sbjct: 418 ALLDACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRK 471


Top