BLASTX nr result

ID: Cephaelis21_contig00030008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00030008
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299253.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]    79   4e-13
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...    69   3e-10
ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat...    68   7e-10
ref|NP_178983.1| pentatricopeptide repeat-containing protein [Ar...    67   1e-09

>ref|XP_002299253.1| predicted protein [Populus trichocarpa] gi|222846511|gb|EEE84058.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/71 (60%), Positives = 53/71 (74%)
 Frame = +1

Query: 10  AIGYFTLFKQSKIFCPNNYTFSYVLKACLGLMDVCKGMEVHSLICKMGFGLDVSVSNALV 189
           AIGYF   K S +F  N YTFS VLKA +GL+D+ KG EVHS++ ++GF  DV V+NALV
Sbjct: 110 AIGYFCSMKDS-VFIYNKYTFSIVLKAFVGLLDLNKGKEVHSMVKQLGFESDVCVANALV 168

Query: 190 DLYSKCGKIRY 222
           D+YSKCG I Y
Sbjct: 169 DMYSKCGCIGY 179


>emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]
          Length = 566

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/74 (51%), Positives = 51/74 (68%)
 Frame = +1

Query: 1   HDAAIGYFTLFKQSKIFCPNNYTFSYVLKACLGLMDVCKGMEVHSLICKMGFGLDVSVSN 180
           H+ AIGYF+L ++  I   N +TFS VLK C+GLMD  KG EVH +I + G G  VSV+N
Sbjct: 107 HEEAIGYFSLMQELGIVA-NKFTFSIVLKQCVGLMDFNKGKEVHCVISRTGLGNVVSVAN 165

Query: 181 ALVDLYSKCGKIRY 222
           + +D+Y KCG + Y
Sbjct: 166 SXIDMYCKCGHVGY 179


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/69 (49%), Positives = 49/69 (71%)
 Frame = +1

Query: 4   DAAIGYFTLFKQSKIFCPNNYTFSYVLKACLGLMDVCKGMEVHSLICKMGFGLDVSVSNA 183
           D AI ++ L + S+ F PNN+TF +VLKAC  L+D+  G+++H+L+ K GF  DV V  +
Sbjct: 94  DDAIEFYGLMR-SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTS 152

Query: 184 LVDLYSKCG 210
           LV LY+KCG
Sbjct: 153 LVCLYAKCG 161


>ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = +1

Query: 10  AIGYFTLFKQSKIFCPNNYTFSYVLKACLGLMDVCKGMEVHSLICKMGFGLDVSVSNALV 189
           A+  F   +QS +  PNN+TF+ VL+AC  L+ +  G ++HS + K+G   +V VSNAL+
Sbjct: 290 ALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALM 349

Query: 190 DLYSKCGKI 216
           D+Y+KCG+I
Sbjct: 350 DVYAKCGEI 358


>ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g13600 gi|4558664|gb|AAD22682.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251150|gb|AEC06244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 697

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = +1

Query: 4   DAAIGYFTLFKQSKIFCPNNYTFSYVLKACLGLMDVCKGMEVHSLICKMGFGLDVSVSNA 183
           + A+ YF +  +   F  N Y+F+ VL AC GL D+ KG++VHSLI K  F  DV + +A
Sbjct: 134 EEALCYFAMMHKEG-FVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192

Query: 184 LVDLYSKCGKI 216
           LVD+YSKCG +
Sbjct: 193 LVDMYSKCGNV 203



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
 Frame = +1

Query: 1   HDAAIGYFTLFKQSKIFCPNNYTFSYVLKACLGLMDVCKGMEVHSLICKMGFGL------ 162
           ++ A+  F L K+  + CP +Y+F+ +LKAC  L ++  GM+ H  + K GF        
Sbjct: 367 NEEALSLFCLLKRESV-CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425

Query: 163 DVSVSNALVDLYSKCG 210
           D+ V N+L+D+Y KCG
Sbjct: 426 DIFVGNSLIDMYVKCG 441


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