BLASTX nr result

ID: Cephaelis21_contig00029518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00029518
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    58   4e-06
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   6e-06
ref|XP_002521266.1| conserved hypothetical protein [Ricinus comm...    57   7e-06
gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    57   7e-06
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ...    57   1e-05

>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +2

Query: 860  AWDKPPNGFLKLNFDGSSIGNPGQVGGGEVLRNYGGDVVFANAFYFGHGTNLHSEVLALL 1039
            +W +P  G++KLNFDGS  G  G+ GGG +LR+  G  + A A       +L +E+ AL 
Sbjct: 226  SWHRPGAGWVKLNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMAEIGALE 285

Query: 1040 RGLHCA-AISVCGILMEIDCKMIVDFLFG 1123
             GL  A  ++V  IL+E D K+ ++ L G
Sbjct: 286  GGLRLALKLNVERILIEGDSKITIEMLSG 314


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
 Frame = +2

Query: 854  IVAWDKPPNGFLKLNFDGSSIGNPGQVGGGEVLRNYGGDVVFANAFYFGHGTNLHSEVLA 1033
            +V W  P  G++KLN DG+S GNPG  GGG ++R   G++    A   G  T   +E+LA
Sbjct: 1206 LVRWQCPKEGWVKLNTDGASKGNPGPAGGGGLIRGPRGEIHEVFAINCGSCTCTKAELLA 1265

Query: 1034 LLRGLHCA-AISVCGILMEIDCKMIVDFLFGSS 1129
            +LRGL  A   +   +++ +D +++   L  ++
Sbjct: 1266 VLRGLMIAWEGNHKQVIVSVDSELVAKLLISNA 1298


>ref|XP_002521266.1| conserved hypothetical protein [Ricinus communis]
            gi|223539534|gb|EEF41122.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 149

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 30/83 (36%), Positives = 43/83 (51%)
 Frame = +2

Query: 809  CFRGLHFQLRVHCV*IVAWDKPPNGFLKLNFDGSSIGNPGQVGGGEVLRNYGGDVVFANA 988
            C  GL+ + R+  + +V WD P   ++K N DG S GNPG   GG V R+Y G  V    
Sbjct: 4    CLSGLYHEPRMQVI-LVGWDPPLENWIKFNIDGCSKGNPGSAAGGGVFRDYRGRCVVGFM 62

Query: 989  FYFGHGTNLHSEVLALLRGLHCA 1057
               G+ + + +E+ A   GL  A
Sbjct: 63   CNIGYCSAIGAELWAAFHGLTIA 85


>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
 Frame = +2

Query: 854  IVAWDKPPNGFLKLNFDGSSIGNPGQVGGGEVLRNYGGDVVFANAFYFGHGTNLHSEVLA 1033
            ++AW  P    LK+N DGSS GNPG+ G G ++RN  G  +   +   G  +NL  E+ A
Sbjct: 1    MIAWHPPTAPGLKINVDGSSFGNPGRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYA 60

Query: 1034 LLRGLHCA-AISVCGILMEIDCKMIVDFLFGS-------SI*LGGIRMIYSR 1165
            +L GL  A  +    I +E D K  +D +  +       +I LG IR + SR
Sbjct: 61   ILNGLQLAWDLGFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSR 112


>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
            gi|31433076|gb|AAP54636.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 791

 Score = 57.0 bits (136), Expect = 1e-05
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
 Frame = +2

Query: 863  WDKPPNGFLKLNFDGSSIGNPGQVGGGEVLRNYGGDVVFANAFYFGHGTN-LHSEVLALL 1039
            W++P +G++KLN DGS   + G+ G G +LRN  GD++F +        N L SE+ A +
Sbjct: 630  WERPKDGWMKLNVDGSFDASSGKGGLGMILRNSAGDIIFTSCKPLERCNNPLESELRACV 689

Query: 1040 RGLHCAA-ISVCGILMEIDCKMIVDFLFGS 1126
             GL  A   ++  I +E DC  +V  L G+
Sbjct: 690  EGLKLAIHWTLLPIQVETDCASVVQLLQGT 719


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