BLASTX nr result

ID: Cephaelis21_contig00028474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028474
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   150   7e-34
emb|CAN72456.1| hypothetical protein VITISV_026051 [Vitis vinifera]   149   2e-33
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...   147   6e-33
emb|CAN75859.1| hypothetical protein VITISV_014707 [Vitis vinifera]   146   1e-32
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   145   1e-32

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  150 bits (378), Expect = 7e-34
 Identities = 113/374 (30%), Positives = 160/374 (42%), Gaps = 18/374 (4%)
 Frame = +2

Query: 47   LIWNIRGIGNVATVRRLKKLCKLHSVSLLVVLEPFVDHSQA-----QSICSKLGXXXXXX 211
            L W +RGI NV T   LK     H   L+ V EP +           SI           
Sbjct: 4    LYWTVRGIDNVDTKIALKNFFNCHKPLLIFVAEPMIAFESVPPWYWDSIGVSKYCVNGRE 63

Query: 212  XXXXKIWCFWNHPLQVTLVSQSSQWVHLEIIHPSLQSAVFVTGVYAQCSHQLRRILWDEL 391
                 +W  W   +   ++  S Q + LEI     QS V+V  VYA   +  RR LW EL
Sbjct: 64   ILQPNLWALWGREVSAIVMFISDQCIALEI--SCHQSTVYVAAVYASTFYLKRRQLWAEL 121

Query: 392  LNLQNLVGNRPWMLGGDFNTIASMDECAGPARPDLGSLHDFADFLGHLPLLEIPTSGGVF 571
             NLQ      PW+  GDFN +    E      P   S  DF ++     L  +PT G  +
Sbjct: 122  TNLQGCFQG-PWLFIGDFNAVLGAHEKRRRRPPPPLSCIDFMNWSNANLLHHLPTLGAFY 180

Query: 572  TWTGVHSRGRLWK-----KLDRVLFNSVWLSCFPSCSVELLS-----RCLSDHSPLLIK- 718
            TW    S GRL       +LDR + N  W++ + S S   L      R  SDH PLL+  
Sbjct: 181  TW----SNGRLGSDNVALRLDRAICNEEWVNFWRSSSCSALGNSALVRHQSDHHPLLMSM 236

Query: 719  -HCVLPLGTKPFRFQHMWLRRHDFTKVVQESWEQPMDGFGMLRFSLKLQHLKVSLKQWNR 895
              C        F+F   W    D  ++V E+W +   G GM R   KL+H+K   + WNR
Sbjct: 237  DFCTSQRSGN-FKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWNR 295

Query: 896  DKFGDIFENVRTA-EETVTVKQLENTFDCTHATHDXXXXXXXXXXXXRSLAKEEDFWKQK 1072
              FGD+   VR A EE   ++Q+ ++   +   +             ++L  +++ W++K
Sbjct: 296  TVFGDVDRKVRMAVEEVNRIQQIIDSVGFSDQLY--AQELEAHLILTKALHYQDELWREK 353

Query: 1073 ARQKWLRDGDRNTS 1114
             R +    GDRNT+
Sbjct: 354  LRDQRFIHGDRNTA 367


>emb|CAN72456.1| hypothetical protein VITISV_026051 [Vitis vinifera]
          Length = 1130

 Score =  149 bits (375), Expect = 2e-33
 Identities = 90/267 (33%), Positives = 150/267 (56%), Gaps = 4/267 (1%)
 Frame = +2

Query: 323  AVFV-TGVYAQCSHQLRRILWDELLNLQNLVGNRPWMLGGDFNTIASMDECAGPARPDLG 499
            AV+V TGVY   + + R  LWDEL  ++ L G+ PW +GGDFN I +  E +   R    
Sbjct: 183  AVWVFTGVYGYFTKEDRECLWDELGAVKGLWGD-PWCVGGDFNVILAQGERSRQGRVT-P 240

Query: 500  SLHDFADFLGHLPLLEIPTSGGVFTWTG-VHSRGRLWKKLDRVLFNSVWLSCFPSCSVEL 676
            ++  FA  +  L L+++P  GG FTW+G +H++   W +LDR L + +WL  F + + + 
Sbjct: 241  AMRRFAQVMDDLELIDJPLQGGSFTWSGGLHNQA--WARLDRFLVSPIWLDQFSNVTQKR 298

Query: 677  LSRCLSDHSPLLIKHCVLPLGTKPFRFQHMWLRRHDFTKVVQESWE-QPMDGFGMLRFSL 853
            LSR +SDH P+ I+      G  PFRF++MWL+   F  +++  W+   + G    + + 
Sbjct: 299  LSRPISDHFPITIEGGGKRRGPSPFRFENMWLKVERFKDLLRSWWQGMSVSGRASYKLAT 358

Query: 854  KLQHLKVSLKQWNRDKFGDIFEN-VRTAEETVTVKQLENTFDCTHATHDXXXXXXXXXXX 1030
            KL+ +K +LK WNR+ FG++  N + T ++     Q+E+  + + +  +           
Sbjct: 359  KLKGIKQNLKVWNREVFGNLESNKLATLQQVDYWDQVES--ERSLSEEEFSKKKEAKEGY 416

Query: 1031 XRSLAKEEDFWKQKARQKWLRDGDRNT 1111
             + +  EE  W+Q +R+ WLR+GD+NT
Sbjct: 417  AKWVKLEEIHWRQLSRELWLREGDKNT 443


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score =  147 bits (370), Expect = 6e-33
 Identities = 108/367 (29%), Positives = 171/367 (46%), Gaps = 8/367 (2%)
 Frame = +2

Query: 35   MISALIWNIRGIGNVATVRRLKKLCKLHSVSLLVVLEPF---VDHSQAQSICSKLGXXXX 205
            MI+ L WNIRG+G       L+K+  +H+   + + E     +D    +SI +       
Sbjct: 1    MINILSWNIRGLGARIKRSALRKMISIHNPLFITIQETKLGEIDPKLIRSIWNSNEVAWT 60

Query: 206  XXXXXXK---IWCFWNHP-LQVTLVSQSSQWVHLEIIHPSLQSAVFVTGVYAQCSHQLRR 373
                      I   W+   + V+    S  W+ +      L     +  +Y  CS + R 
Sbjct: 61   FSPADGNAGGILTLWSKTFITVSSSHVSKNWIAVRGTISHLNWDCSLISIYNPCSVEERA 120

Query: 374  ILWDELLNLQNLVGNRPWMLGGDFNTIASMDECAGPARPDLGSLHDFADFLGHLPLLEIP 553
            ++W E+L         P ++ GDFN   + ++    A    GS +DF  F+  L L EIP
Sbjct: 121  VVWGEILEFWT-TSKLPCLIIGDFNETLASNDRGSLAISQSGS-NDFRQFVQSLQLTEIP 178

Query: 554  TSGGVFTWTGVHSRGRLWKKLDRVLFNSVWLSCFPSCSVELLSRCLSDHSPLLIKHCVLP 733
            T+   FTW     RG    KLDR   N  WL+ +P+  + LL+R LSDH PLL+   V  
Sbjct: 179  TTER-FTWF----RGNSKSKLDRCFVNPEWLTHYPTLKLSLLNRGLSDHCPLLLNSSVRN 233

Query: 734  LGTKPFRFQHMWLRRHDFTKVVQESWEQPMDGFGMLRFSLKLQHLKVSLKQWNRDKFGDI 913
             G KPF+FQ+ WL      ++V+++W Q     G+++   KL+ +K  LK WN   FG+I
Sbjct: 234  WGPKPFKFQNCWLSDPRCMRLVKDTW-QKSSPMGLVQ---KLKTVKKDLKDWNEKVFGNI 289

Query: 914  FENVRTAEETVT-VKQLENTFDCTHATHDXXXXXXXXXXXXRSLAKEEDFWKQKARQKWL 1090
              N++  E  +  + ++ N  D    + +              +  +E +W Q++R KWL
Sbjct: 290  EANIKQLEHEINQLDKISNERDLD--SFELEKKKKAQVDLWSWMKTKESYWSQQSRIKWL 347

Query: 1091 RDGDRNT 1111
            + GDRNT
Sbjct: 348  KQGDRNT 354


>emb|CAN75859.1| hypothetical protein VITISV_014707 [Vitis vinifera]
          Length = 1407

 Score =  146 bits (368), Expect = 1e-32
 Identities = 90/283 (31%), Positives = 142/283 (50%), Gaps = 20/283 (7%)
 Frame = +2

Query: 323  AVFV-TGVYAQCSHQLRRILWDELLNLQNLVGNRPWMLGGDFNTIASMDECAGPARPDLG 499
            AV+V TGVY   +   R  +WDE+  ++ L    PW +GGDFN I S +E     R    
Sbjct: 503  AVWVFTGVYGPFTKNERDCMWDEIGAIRGL-WEEPWCVGGDFNVIRSQNERNRQGRIS-A 560

Query: 500  SLHDFADFLGHLPLLEIPTSGGVFTWTGVHSRGRLWKKLDRVLFNSVWLSCFPSCSVELL 679
            ++  FA  +  L L+++P  GG +TW+G     R W +LDR L  S W+  F S   + L
Sbjct: 561  AMRKFAQVIDELGLIDLPLQGGDYTWSG-GPNNRYWARLDRFLVTSCWIDQFSSVIQKRL 619

Query: 680  SRCLSDHSPLLIKHCVLPLGTKPFRFQHMWLRRHDFTKVVQESWEQ-PMDGFGMLRFSLK 856
            SR  SDH P++++   +  G  PFRF++MWL+   F +++   W+   + G    R + K
Sbjct: 620  SRPASDHFPVVLEGGTVRRGPSPFRFENMWLKVEGFQELIHSWWQGIEVRGSASFRLATK 679

Query: 857  LQHLKVSLKQWNRDKFGDIFENVRTA------------------EETVTVKQLENTFDCT 982
            ++ +K  LK WNR+ FG + +N   A                  EETV+ K+ ++++   
Sbjct: 680  MKAVKQKLKVWNREVFGRVEDNKAAALQLVDHWDRVECERRLSEEETVSKKEAKDSY--- 736

Query: 983  HATHDXXXXXXXXXXXXRSLAKEEDFWKQKARQKWLRDGDRNT 1111
                             + ++ EE  W+Q +R+ WLR+GD NT
Sbjct: 737  ----------------AKWVSLEETHWRQHSRELWLREGDNNT 763


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  145 bits (367), Expect = 1e-32
 Identities = 100/383 (26%), Positives = 180/383 (46%), Gaps = 14/383 (3%)
 Frame = +2

Query: 5    VSSSFFFLSPMISALIWNIRGIGNVATVRRLKKLCKLHSVSLLVVLEPFVDHSQAQSICS 184
            VSS F      I  + WN+RG  + +  + +K + +     L+ + E  +  +  + +  
Sbjct: 352  VSSCFM----KIKLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIQETKIQ-TMTEGVVR 406

Query: 185  KLGXXXXXXXXXXK--------IWCFWNHPLQVTLVSQSSQWVHLEIIHPSLQSAVFVTG 340
             LG                   + C+    L++  +   +  +   + +   +     TG
Sbjct: 407  SLGSGRFLDWGAMGAQGSAGGILVCWDKRSLELLEMEVGNYSISCRLKNVENEVVWTFTG 466

Query: 341  VYAQCSHQLRRILWDELLNLQNLVGNRPWMLGGDFNTIASMDECAGPARPDLGSLHDFAD 520
            VY  C+ + R +LW+EL  ++  + + PW +GGDFN   S  + +     + G++  FA 
Sbjct: 467  VYGPCNRKEREMLWEELGAIRG-IWDEPWCIGGDFNVTLSQRDRSRQGSLN-GAMRRFAQ 524

Query: 521  FLGHLPLLEIPTSGGVFTWTGVHSRGRLWKKLDRVLFNSVWLSCFPSCSVELLSRCLSDH 700
             +  L L+++P  GGV++W+G  +  + W +LDR L +  WL  F       L R  SDH
Sbjct: 525  VVDDLALIDLPLQGGVYSWSGGRNN-QTWARLDRFLVSQGWLDIFRGAVQCRLPRPTSDH 583

Query: 701  SPLLIKHCVLPLGTKPFRFQHMWLRRHDFTKVVQESWE-QPMDGFGMLRFSLKLQHLKVS 877
             P+L+    +  G  PFRF++MWL+   F ++++E W+     G    R + K++ +K  
Sbjct: 584  FPILLNGGGMSRGPSPFRFENMWLKVDGFKELLREWWQGGERVGRTSFRMAAKMKVMKEK 643

Query: 878  LKQWNRDKFGDIFENVRTAEETVTVKQLENTFDCTHATHDXXXXXXXXXXXXRSLAK--- 1048
            +K WNRD FG +  N     +++ ++Q+E  +D   +  D            +   K   
Sbjct: 644  IKVWNRDVFGRVEVN-----KSLALRQIE-FWDRVESGRDLSERETDMKNEAKENFKKWV 697

Query: 1049 --EEDFWKQKARQKWLRDGDRNT 1111
              EE  W+Q +R+ WLR+GD+NT
Sbjct: 698  LLEEAHWRQMSRELWLREGDKNT 720


Top