BLASTX nr result

ID: Cephaelis21_contig00028079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00028079
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...   240   2e-61
ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|2...   227   2e-57
ref|XP_002532091.1| pentatricopeptide repeat-containing protein,...   222   7e-56
ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi...   214   2e-53
ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containi...   214   2e-53

>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score =  240 bits (613), Expect = 2e-61
 Identities = 116/196 (59%), Positives = 150/196 (76%)
 Frame = -1

Query: 589 SYQIFFHQTRRIITNNTELQHDKSAIPEKLLSLLKQCKFSRQVQQIQTQMLIHYIHKHNF 410
           S+ I  H T+ +  +    +H +  + +KLLSLLKQC  ++ +QQI TQM+I+ IHK NF
Sbjct: 8   SHLISRHFTKALAKSQ---RHAQQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNF 64

Query: 409 LLSKIIELKDLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKP 230
           LL + I+LKD N A LLF+++P PN+YAFNI IRGLTTTW+KF+L ++FY++MK  G++P
Sbjct: 65  LLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRP 124

Query: 229 DNFTYPFVFISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVF 50
           +NFTYPFVFI+C NLL   HG+ AH  V+K GL  D HV HSLITMYSRCG+LG AR+VF
Sbjct: 125 NNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVF 184

Query: 49  DEIEVRDLVSWNSMIS 2
           DEI  +DLVSWNSMIS
Sbjct: 185 DEISEKDLVSWNSMIS 200



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 40/127 (31%), Positives = 66/127 (51%)
 Frame = -1

Query: 382 DLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKPDNFTYPFVF 203
           DL+ A  +F R+   +   +N  I G        D A+  +  M+  G+ PD  T   V 
Sbjct: 277 DLSSARRVFDRMVKKDVVTWNAMITGYAQNGVS-DEAIILFSGMRESGVNPDKITLVGVL 335

Query: 202 ISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVFDEIEVRDLV 23
            +C ++ A + G+       + GL  D +V  +LI MY++CG L  A +VF+++  ++ V
Sbjct: 336 SACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEV 395

Query: 22  SWNSMIS 2
           SWN+MIS
Sbjct: 396 SWNAMIS 402



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 40/141 (28%), Positives = 72/141 (51%)
 Frame = -1

Query: 424 HKHNFLLSKIIELKDLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKF 245
           H  + L++      +L  A  +F  +   +  ++N  I G +      D A+  + +M+ 
Sbjct: 162 HVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGD-AVGLFGEMRD 220

Query: 244 LGLKPDNFTYPFVFISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGF 65
            G +PD  T   +  +CG+L     G      V+++ + L+  V  +LI MY +CG L  
Sbjct: 221 AGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSS 280

Query: 64  ARKVFDEIEVRDLVSWNSMIS 2
           AR+VFD +  +D+V+WN+MI+
Sbjct: 281 ARRVFDRMVKKDVVTWNAMIT 301


>ref|XP_002318172.1| predicted protein [Populus trichocarpa] gi|222858845|gb|EEE96392.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  227 bits (579), Expect = 2e-57
 Identities = 111/191 (58%), Positives = 143/191 (74%)
 Frame = -1

Query: 574 FHQTRRIITNNTELQHDKSAIPEKLLSLLKQCKFSRQVQQIQTQMLIHYIHKHNFLLSKI 395
           +H     +   T+ +H ++ + EKLLSL+KQCK    ++QI  QMLI+ I K NFLLSKI
Sbjct: 13  YHLPLSNLNFQTQKEHHQT-LTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKI 71

Query: 394 IELKDLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKPDNFTY 215
           I+LKDL YA L+F +L  PN YAFN+ +RGL TTWKK+D  ++ Y+K+K LGLK +NFTY
Sbjct: 72  IDLKDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTY 131

Query: 214 PFVFISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVFDEIEV 35
           PF+FI+CGN+    HG++ HC V K GL  D +V HSLITMY+RCG++GFARKVFDE+  
Sbjct: 132 PFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGD 191

Query: 34  RDLVSWNSMIS 2
           RDLVSWNSMIS
Sbjct: 192 RDLVSWNSMIS 202



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 40/127 (31%), Positives = 63/127 (49%)
 Frame = -1

Query: 382 DLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKPDNFTYPFVF 203
           DL  A  +F  +PN +   +N  I G        + A+  +  M+  G  PD  T   V 
Sbjct: 279 DLISARRVFDSMPNKDVVTWNAIITGYAQNGASNE-AIVLFNGMREAGPHPDRVTMIEVL 337

Query: 202 ISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVFDEIEVRDLV 23
            +C  + A + G+       + GL  D +V  +LI MY++CG L  A +VF+ +  ++ V
Sbjct: 338 SACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEV 397

Query: 22  SWNSMIS 2
           SWN+MIS
Sbjct: 398 SWNAMIS 404



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 36/136 (26%), Positives = 73/136 (53%)
 Frame = -1

Query: 409 LLSKIIELKDLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKP 230
           L++      ++ +A  +F  + + +  ++N  I G +      + A+  + +M+  G +P
Sbjct: 169 LITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKE-AIGLFMEMREEGFEP 227

Query: 229 DNFTYPFVFISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVF 50
           D  T   V  +CG+L     GR     V++  + ++ ++  +LI MY +CG L  AR+VF
Sbjct: 228 DEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVF 287

Query: 49  DEIEVRDLVSWNSMIS 2
           D +  +D+V+WN++I+
Sbjct: 288 DSMPNKDVVTWNAIIT 303


>ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528238|gb|EEF30293.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  222 bits (566), Expect = 7e-56
 Identities = 105/176 (59%), Positives = 134/176 (76%)
 Frame = -1

Query: 529 HDKSAIPEKLLSLLKQCKFSRQVQQIQTQMLIHYIHKHNFLLSKIIELKDLNYALLLFTR 350
           H    +  KLL LLKQC+  + +QQI  QM+I+ + K NFLL +II+LKD  YA LLFT+
Sbjct: 26  HQLQTLTVKLLKLLKQCRSKKPMQQIHAQMIINSLSKPNFLLPRIIDLKDFAYASLLFTQ 85

Query: 349 LPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKPDNFTYPFVFISCGNLLAYEH 170
           +PNPNDYAFN+ IRGLTTTW+ + LA+  Y++MK LGLKP+NFT+PF+FISC NL+A   
Sbjct: 86  MPNPNDYAFNVMIRGLTTTWRNYSLAIQLYYQMKSLGLKPNNFTFPFLFISCANLVALHC 145

Query: 169 GRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVFDEIEVRDLVSWNSMIS 2
           G++AH  V+K G   D H+ HSLITMY++C +L  ARKVFDEI  RD+VSWNSMIS
Sbjct: 146 GQIAHSLVLKMGFNNDSHINHSLITMYAKCSKLDSARKVFDEILERDIVSWNSMIS 201



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 37/127 (29%), Positives = 63/127 (49%)
 Frame = -1

Query: 382 DLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKPDNFTYPFVF 203
           DL  A  +F  +   +   +N  I G        D A+  +  M+  G+ P+  T   V 
Sbjct: 278 DLMSARRVFDNMAEKDIVTWNAMITGYAQNGAS-DEAMTLFNVMREAGITPNEITMVVVL 336

Query: 202 ISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVFDEIEVRDLV 23
            +C ++ A + G+       + GL  D +V  +L+ MY++CG L  A +VF+ +  ++ V
Sbjct: 337 SACASIGALDLGKWVEMYASQRGLQHDVYVASALVDMYAKCGSLDNALRVFENMPHKNEV 396

Query: 22  SWNSMIS 2
           SWN+MIS
Sbjct: 397 SWNAMIS 403



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 37/141 (26%), Positives = 71/141 (50%)
 Frame = -1

Query: 424 HKHNFLLSKIIELKDLNYALLLFTRLPNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKF 245
           H ++ L++   +   L+ A  +F  +   +  ++N  I G T      + A+  + +M+ 
Sbjct: 163 HINHSLITMYAKCSKLDSARKVFDEILERDIVSWNSMISGYTKMGFARE-AVRLFMEMRE 221

Query: 244 LGLKPDNFTYPFVFISCGNLLAYEHGRLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGF 65
            G +P   T   +  +CG+L     G+     +    + L+ +   +LI MY +CG L  
Sbjct: 222 QGFEPVEMTLVSILGACGDLGDLALGKWVEALIGDKKMELNSYTASALIDMYGKCGDLMS 281

Query: 64  ARKVFDEIEVRDLVSWNSMIS 2
           AR+VFD +  +D+V+WN+MI+
Sbjct: 282 ARRVFDNMAEKDIVTWNAMIT 302


>ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  214 bits (544), Expect = 2e-53
 Identities = 101/175 (57%), Positives = 133/175 (76%)
 Frame = -1

Query: 526 DKSAIPEKLLSLLKQCKFSRQVQQIQTQMLIHYIHKHNFLLSKIIELKDLNYALLLFTRL 347
           ++ A+ +K  SLL+QC   +Q++QI  Q+L + IHK N  L KI +LKD  YA + F+ +
Sbjct: 27  NRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNI 86

Query: 346 PNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKPDNFTYPFVFISCGNLLAYEHG 167
            +P +Y+FN+ IRGL+T W K  LAL+FY +MKFLGLKP+N TYPF+FI+C NLLA E+G
Sbjct: 87  LDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146

Query: 166 RLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVFDEIEVRDLVSWNSMIS 2
           R+ HC V++ GL  D HV HSLITMY+RCG++G ARKVFDEI  +DLVSWNSMIS
Sbjct: 147 RMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMIS 201


>ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  214 bits (544), Expect = 2e-53
 Identities = 101/175 (57%), Positives = 133/175 (76%)
 Frame = -1

Query: 526 DKSAIPEKLLSLLKQCKFSRQVQQIQTQMLIHYIHKHNFLLSKIIELKDLNYALLLFTRL 347
           ++ A+ +K  SLL+QC   +Q++QI  Q+L + IHK N  L KI +LKD  YA + F+ +
Sbjct: 27  NRQALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNI 86

Query: 346 PNPNDYAFNIFIRGLTTTWKKFDLALDFYFKMKFLGLKPDNFTYPFVFISCGNLLAYEHG 167
            +P +Y+FN+ IRGL+T W K  LAL+FY +MKFLGLKP+N TYPF+FI+C NLLA E+G
Sbjct: 87  LDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146

Query: 166 RLAHCRVMKDGLYLDFHVCHSLITMYSRCGQLGFARKVFDEIEVRDLVSWNSMIS 2
           R+ HC V++ GL  D HV HSLITMY+RCG++G ARKVFDEI  +DLVSWNSMIS
Sbjct: 147 RMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMIS 201


Top