BLASTX nr result

ID: Cephaelis21_contig00027993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027993
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote...    66   3e-09
gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea b...    66   3e-09
gb|AFK41754.1| unknown [Lotus japonicus]                               66   3e-09
gb|AFK37213.1| unknown [Medicago truncatula]                           66   3e-09
ref|XP_003632024.1| PREDICTED: U6 snRNA-associated Sm-like prote...    66   3e-09

>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus]
          Length = 87

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +3

Query: 126 LIDRCIGSKIWVIMKRDKELVGTLRGFEVYVNL 224
           LIDRCIGSKIWVIMK DKELVGTLRGF+VYVN+
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNM 45


>gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
          Length = 87

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +3

Query: 126 LIDRCIGSKIWVIMKRDKELVGTLRGFEVYVNL 224
           LIDRCIGSKIWVIMK DKELVGTLRGF+VYVN+
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNM 45


>gb|AFK41754.1| unknown [Lotus japonicus]
          Length = 87

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +3

Query: 126 LIDRCIGSKIWVIMKRDKELVGTLRGFEVYVNL 224
           LIDRCIGSKIWVIMK DKELVGTLRGF+VYVN+
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNM 45


>gb|AFK37213.1| unknown [Medicago truncatula]
          Length = 87

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +3

Query: 126 LIDRCIGSKIWVIMKRDKELVGTLRGFEVYVNL 224
           LIDRCIGSKIWVIMK DKELVGTLRGF+VYVN+
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNM 45


>ref|XP_003632024.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 2
           [Vitis vinifera]
          Length = 88

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +3

Query: 126 LIDRCIGSKIWVIMKRDKELVGTLRGFEVYVNL 224
           LIDRCIGSKIWVIMK DKELVGTLRGF+VYVN+
Sbjct: 13  LIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNM 45