BLASTX nr result

ID: Cephaelis21_contig00027978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027978
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]    70   2e-10
ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c...    67   2e-09
ref|XP_002513029.1| protein with unknown function [Ricinus commu...    67   2e-09
dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatu...    65   8e-09

>ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/59 (62%), Positives = 46/59 (77%)
 Frame = -1

Query: 267 KRINSKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTDGNTTKD 91
           KR ++KR K+++    KVVYISSPMKVKTSAS+FR LVQELTG+DSD  R+ D N  +D
Sbjct: 12  KRSHTKRGKKAI----KVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDINGARD 66


>emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
          Length = 124

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/54 (61%), Positives = 43/54 (79%)
 Frame = -1

Query: 252 KRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTDGNTTKD 91
           K++ +S  + +KVVYISSPMKVKTSAS+FR LVQELTGRDSD+ RY +    ++
Sbjct: 2   KKQGKSRRAAVKVVYISSPMKVKTSASKFRALVQELTGRDSDVERYMENKEREE 55


>ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
           [Cucumis sativus] gi|449487122|ref|XP_004157503.1|
           PREDICTED: sigma factor binding protein 1,
           chloroplastic-like [Cucumis sativus]
          Length = 140

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/49 (65%), Positives = 41/49 (83%)
 Frame = -1

Query: 255 SKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTD 109
           +KR K+S  +  KVVYISSPMKVKTSAS+FR+LVQ+LTG+DSD  R+ +
Sbjct: 9   AKRSKKSAGAGFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFME 57


>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
           gi|223548040|gb|EEF49532.1| protein with unknown
           function [Ricinus communis]
          Length = 143

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = -1

Query: 255 SKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTDGNTTKDFHHQD 76
           SKR K+ +    KVVYISSPMKV+TSAS+FR LVQELTG+DSD +R+ D N   +  +  
Sbjct: 15  SKRSKKGI----KVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAE--NYS 68

Query: 75  FEIFPEIKRAS 43
            E  P+  RA+
Sbjct: 69  TETTPDRSRAA 79


>dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris]
          Length = 146

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 31/49 (63%), Positives = 40/49 (81%)
 Frame = -1

Query: 255 SKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTD 109
           +KR ++S  +  KVVYISSPMKVKTSAS+FR+LVQ LTG+DSD  R+ +
Sbjct: 9   AKRSRKSAAADFKVVYISSPMKVKTSASKFRSLVQRLTGQDSDAERFME 57


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