BLASTX nr result
ID: Cephaelis21_contig00027978
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00027978 (507 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera] 70 2e-10 ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c... 67 2e-09 ref|XP_002513029.1| protein with unknown function [Ricinus commu... 67 2e-09 dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatu... 65 8e-09 >ref|XP_002303937.1| predicted protein [Populus trichocarpa] gi|222841369|gb|EEE78916.1| predicted protein [Populus trichocarpa] Length = 138 Score = 71.2 bits (173), Expect = 8e-11 Identities = 37/59 (62%), Positives = 46/59 (77%) Frame = -1 Query: 267 KRINSKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTDGNTTKD 91 KR ++KR K+++ KVVYISSPMKVKTSAS+FR LVQELTG+DSD R+ D N +D Sbjct: 12 KRSHTKRGKKAI----KVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDINGARD 66 >emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera] Length = 124 Score = 69.7 bits (169), Expect = 2e-10 Identities = 33/54 (61%), Positives = 43/54 (79%) Frame = -1 Query: 252 KRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTDGNTTKD 91 K++ +S + +KVVYISSPMKVKTSAS+FR LVQELTGRDSD+ RY + ++ Sbjct: 2 KKQGKSRRAAVKVVYISSPMKVKTSASKFRALVQELTGRDSDVERYMENKEREE 55 >ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like [Cucumis sativus] gi|449487122|ref|XP_004157503.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like [Cucumis sativus] Length = 140 Score = 67.0 bits (162), Expect = 2e-09 Identities = 32/49 (65%), Positives = 41/49 (83%) Frame = -1 Query: 255 SKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTD 109 +KR K+S + KVVYISSPMKVKTSAS+FR+LVQ+LTG+DSD R+ + Sbjct: 9 AKRSKKSAGAGFKVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFME 57 >ref|XP_002513029.1| protein with unknown function [Ricinus communis] gi|223548040|gb|EEF49532.1| protein with unknown function [Ricinus communis] Length = 143 Score = 67.0 bits (162), Expect = 2e-09 Identities = 38/71 (53%), Positives = 49/71 (69%) Frame = -1 Query: 255 SKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTDGNTTKDFHHQD 76 SKR K+ + KVVYISSPMKV+TSAS+FR LVQELTG+DSD +R+ D N + + Sbjct: 15 SKRSKKGI----KVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAE--NYS 68 Query: 75 FEIFPEIKRAS 43 E P+ RA+ Sbjct: 69 TETTPDRSRAA 79 >dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris] Length = 146 Score = 64.7 bits (156), Expect = 8e-09 Identities = 31/49 (63%), Positives = 40/49 (81%) Frame = -1 Query: 255 SKRKKRSVNSLMKVVYISSPMKVKTSASRFRTLVQELTGRDSDISRYTD 109 +KR ++S + KVVYISSPMKVKTSAS+FR+LVQ LTG+DSD R+ + Sbjct: 9 AKRSRKSAAADFKVVYISSPMKVKTSASKFRSLVQRLTGQDSDAERFME 57