BLASTX nr result
ID: Cephaelis21_contig00027935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00027935
(688 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACU33853.1| PPR1 protein [Capsicum annuum] 69 2e-22
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida] 64 2e-21
gb|AAM52339.1| fertility restorer [Petunia x hybrida] 64 4e-21
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida] 66 4e-21
ref|XP_002325779.1| predicted protein [Populus trichocarpa] gi|2... 67 5e-19
>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 68.9 bits (167), Expect(2) = 2e-22
Identities = 33/78 (42%), Positives = 50/78 (64%)
Frame = +1
Query: 289 RDMCIMGLPVSEYTLTMAINCYCLEGHVDLGFSVLGALFKRGLVPNVITFSTVLRGLFRQ 468
R+M I+G+P+S+ L + N YCL +D FSVL K G+ NV+TF+T+L GLF +
Sbjct: 86 REMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAE 145
Query: 469 HMVPRAQELFGRIIYEKL 522
+ V A LF +++ EK+
Sbjct: 146 NKVTDAVVLFKKLVREKI 163
Score = 63.2 bits (152), Expect(2) = 2e-22
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +2
Query: 515 KSCQPDQFMIGIVIDGLSKAGNTDKAVEFLRIMCNGDTMPNTIMYSTIIDGLCKD 679
K C+P++ M G V++GLSK G+T+K + LRIM G+T P+ YS +ID LCKD
Sbjct: 162 KICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKD 216
>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 64.3 bits (155), Expect(2) = 2e-21
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = +1
Query: 289 RDMCIMGLPVSEYTLTMAINCYCLEGHVDLGFSVLGALFKRGLVPNVITFSTVLRGLFRQ 468
R++ + +PV E+ L++ +N CL DLGFSVL FK+G+ N + F+T+LRGLF +
Sbjct: 96 REIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAE 155
Query: 469 HMVPRAQELFGRIIYEKL 522
+ V A LF +++ E +
Sbjct: 156 NKVKDAVHLFKKLVRENI 173
Score = 63.9 bits (154), Expect(2) = 2e-21
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 521 CQPDQFMIGIVIDGLSKAGNTDKAVEFLRIMCNGDTMPNTIMYSTIIDGLCKDKLV 688
C+P++ M G V++GL K G+T KA + LR+M G T PNT +YS +ID CKD ++
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGML 229
>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 63.9 bits (154), Expect(2) = 4e-21
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +1
Query: 289 RDMCIMGLPVSEYTLTMAINCYCLEGHVDLGFSVLGALFKRGLVPNVITFSTVLRGLFRQ 468
R++ + +PV + L+ +N CL DLGFSVL FK+G+ N +TF+T++RGLF +
Sbjct: 96 REIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAE 155
Query: 469 HMVPRAQELFGRIIYEKL 522
+ V A LF +++ E +
Sbjct: 156 NKVKDAVHLFKKLVRENI 173
Score = 63.5 bits (153), Expect(2) = 4e-21
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 521 CQPDQFMIGIVIDGLSKAGNTDKAVEFLRIMCNGDTMPNTIMYSTIIDGLCKDKLV 688
C+PD+ M G V+DGL K G+T KA + LR+M G T P+T +Y+ +ID CKD ++
Sbjct: 174 CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGML 229
>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 66.2 bits (160), Expect(2) = 4e-21
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +1
Query: 289 RDMCIMGLPVSEYTLTMAINCYCLEGHVDLGFSVLGALFKRGLVPNVITFSTVLRGLFRQ 468
R++ + +PV E+ L++ +N CL DLGFSVL FK+G+ N +TF+T++RGLF +
Sbjct: 96 REIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAE 155
Query: 469 HMVPRAQELFGRIIYEKL 522
+ V A LF +++ E +
Sbjct: 156 NKVKDAVHLFKKLVRENI 173
Score = 61.2 bits (147), Expect(2) = 4e-21
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +2
Query: 521 CQPDQFMIGIVIDGLSKAGNTDKAVEFLRIMCNGDTMPNTIMYSTIIDGLCKDKLV 688
C+P++ M G V++GL K G+T KA + LR+M G T PNT Y+ +ID CKD ++
Sbjct: 174 CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGML 229
>ref|XP_002325779.1| predicted protein [Populus trichocarpa] gi|222862654|gb|EEF00161.1|
predicted protein [Populus trichocarpa]
Length = 586
Score = 67.0 bits (162), Expect(2) = 5e-19
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +1
Query: 289 RDMCIMGLPVSEYTLTMAINCYCLEGHVDLGFSVLGALFKRGLVPNVITFSTVLRGLFRQ 468
+ M + GL + TL + INC+CL HVDLGFSVL + K GL P +ITF+T++ GL +
Sbjct: 115 KQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKA 174
Query: 469 HMVPRAQELFGRII 510
+A ELF ++
Sbjct: 175 GEFAQALELFDDMV 188
Score = 53.1 bits (126), Expect(2) = 5e-19
Identities = 24/58 (41%), Positives = 34/58 (58%)
Frame = +2
Query: 515 KSCQPDQFMIGIVIDGLSKAGNTDKAVEFLRIMCNGDTMPNTIMYSTIIDGLCKDKLV 688
+ CQPD + +I+GL K G T A ++ M P+ + YST+ID LCKD+LV
Sbjct: 190 RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLV 247
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 21/61 (34%), Positives = 37/61 (60%)
Frame = +1
Query: 328 TLTMAINCYCLEGHVDLGFSVLGALFKRGLVPNVITFSTVLRGLFRQHMVPRAQELFGRI 507
T ++ I+ +C EG+V VL + + G+ PNVIT+++++ G Q V A++LF +
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362
Query: 508 I 510
I
Sbjct: 363 I 363
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 515 KSCQPDQFMIGIVIDGLSKAGNTDKAVEFLRIMCNGDTMPNTIMYSTIIDGLCK 676
+ C+PD F I+I+G D+A + M + PNT+ Y+T+I C+
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ 418
Score = 39.3 bits (90), Expect(2) = 5e-06
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = +2
Query: 503 G*YMKSCQPDQFMIGIVIDGLSKAGNTDKAVEFLRIMCNGDTMPNTIMYSTIIDGLCKDK 682
G Y+K P+ M I+ID + K+GN + A + + P+ +Y+TII+GLCK+
Sbjct: 469 GTYLK---PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525
Query: 683 LV 688
L+
Sbjct: 526 LL 527
Score = 37.0 bits (84), Expect(2) = 5e-06
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +1
Query: 295 MCIMGLPVSEYTLTMAINCYCLEGHVDLGFSVLGALFKRGLVPNVITFSTVLRGLFRQHM 474
M G ++ ++ IN YC+ +D + + +GL PN ++++T++ +
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421
Query: 475 VPRAQELF 498
+ A+ELF
Sbjct: 422 LREARELF 429